Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1063 ATGGAAGATGCCTCCATTTGCCATGAACAAGTGCCAGATGGTGATTGCATTGAGAATCAGAAAGAAGGTGGTGCAATAACTGAATTAGATGGTCAAAATGGGTTTTCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCCTACGATGATGCGTACAATTATTATATCTGCTATGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTGCTGTGCTGTAGCAGTCAGGGTTTTAAAAGAATGAAAGATGTTAACCATTTAAGAAAGGAAACAAGAACTGGTTGCCCTGCAATGATAAGGATGAGGTTAGTGGACTCTCAGAGATGGAGGGTACTTGAGGTTACACTTGAACATAACCACCTTTTAGGTGCTAAGTTATACAGATCAATTAAGAAGATGGGAGTTGGAGCCAAACAGAAGCAACTACCTGGTTCTGATGACGAAGTTCGAACAATCAAGTTATACCGGGCACTTGTGATAGATGCAGCAGGTGATGTTAATGCAAACTCCAGTACTATAGAATTCAGGACTTCTTCAGAATCTTCCAGTAAGTTGAACCTTAAAAAAGGTGACACACAGGCCATTTATAACTACTTTTGTCGCATGCAACTGACCAATCCAAATTTCTTTTACTTGATGGATTTTAATGATGAAGGACTGTTGAGAAATGTATTTTGGGCTGATGCAAGGTCTAGGGCTGCGTGTGGCTATTTTGGTGATGTTATTTATTTGGACAACTCATATTTGTCAAACAAATATGAAATCCCTCTTGTGGCATTTGTTGGAATTAATCACCATGGTCAATCAGTGTTATTGGGCTGTGGTCTACTCGCTGGTGAAACATTAGAATCATATATATGGTTATTCAGAACATGGGTGACATGCATGTCAGGATCTCCTCCCCAAACTATTATCACTGATAGGTGCAAGGCCTTGCAGAATGCGATTGCAGAAGTTTTTCCAAGAACTTGTCATTGTTTTGGCTTGTCACTAATCATGAAAAGAGTACCAGAGAAGCTTGGAGGGTTACGTAATTATGATGCAATTAGGAAAGCACTGAGTAAAGCTGTTTATGAGACGTTGAAAGTAATTGAGTTTGAAGCAGCGTGGGGATTTATGATCCAGCGATTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACAGAGTTCATTGGGCTCCAGTATTCTTGAAGGACAAATTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAGACCTTGAGTCCTTTTTTTGAGAAATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATAAGAAGCACAAGGAAGAATCCGCTGCCGACATGGACTCGAGAGGCTCTACTCCCTTGCTGAAAACAAGATGTTCTTTTGAATTTCAGTTATCTAGAATGTTCACACGAGAAATATTCATGAAGTTCCAATATGAAGTTGAAGAAATGTATTCTTGTTTCAGTACCACACAGTTACACGTGGATGGCGCAATTATAATTTTCTTAGTCAAGGATCGTGTTTTAAGTGAAGGAAATAGAAGGGAGATCAAGGATTTTGAAGTCTTGTACAACAGGACTGCCGGTGAAGTTCGCTGCATCTGTAGCTGCTTTAACTTCAACGGGTATTTATGTAGGCATGCACTGTGCGTGCTCAATTTTAATGGGGTGGAGGAGATACCTTCCAGATACATTCTTTCCAGATGGAAAAAAGATTACAAGCGCCTACATGTTCCTGATCATAGCTCTGGTATTGTCGATGAGACCGATCGTATTCAATGGTTTAGTCAGTTATTTAGAAGCTCCTTGCAAGTTGTGGAAGAAGGGGCAATTTCTCTAGACCACTATAATGTAGCCTTGCATGCTTTTCAGGATTCTTTGAATAGGATACATGATGTAGAACAGAGACACGAGTAA 2001 0.4033 MEDASICHEQVPDGDCIENQKEGGAITELDGQNGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRMKDVNHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKLYRSIKKMGVGAKQKQLPGSDDEVRTIKLYRALVIDAAGDVNANSSTIEFRTSSESSSKLNLKKGDTQAIYNYFCRMQLTNPNFFYLMDFNDEGLLRNVFWADARSRAACGYFGDVIYLDNSYLSNKYEIPLVAFVGINHHGQSVLLGCGLLAGETLESYIWLFRTWVTCMSGSPPQTIITDRCKALQNAIAEVFPRTCHCFGLSLIMKRVPEKLGGLRNYDAIRKALSKAVYETLKVIEFEAAWGFMIQRFGVCDHEWLRSIYEDRVHWAPVFLKDKFFAGMSAASPGETLSPFFEKYVHKQTPLKEFLDKYELALHKKHKEESAADMDSRGSTPLLKTRCSFEFQLSRMFTREIFMKFQYEVEEMYSCFSTTQLHVDGAIIIFLVKDRVLSEGNRREIKDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHVPDHSSGIVDETDRIQWFSQLFRSSLQVVEEGAISLDHYNVALHAFQDSLNRIHDVEQRHE 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1063 666 ProSiteProfiles Zinc finger SWIM-type profile. 548 584 IPR007527 GO:0008270
Prci13g1063 666 Pfam FAR1 DNA-binding domain 59 142 IPR004330 -
Prci13g1063 666 Pfam SWIM zinc finger 558 580 IPR007527 GO:0008270
Prci13g1063 666 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 33 660 IPR031052 GO:0006355
Prci13g1063 666 SMART 26again6 559 586 IPR006564 GO:0008270
Prci13g1063 666 Pfam MULE transposase domain 261 354 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1063 Prci-Chr13 8865147 8869085 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1063 MULE 1.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1063 - K17604 gmx:100796448 1130.55