Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1060 ATGGGTAGGATTTTCATGCGTGTGCTTGAAGTGAAGGTCTTATCATTGTTGGCCTTGAATATGGAAGATGCCTCCATTTGCCATGAACAAGTGCCAGATGGTGATTGCATTGAGAATCAGAAAGAAGGTGGTGCAATAACTGAATTAGATGGTCAAAATGGGTTTTCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCCTACGATGATGCGTACAATTATTATATCTGCTATGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTGCTGTGCTGTAGCAGTCAGGGTTTTAAAAGAATGAAAGATGTTAACCATTTAAGAAAGGAAACAAGAACTGGTTGCCCTGCAATGATAAGGATGAGGTTAGTGGACTCTCAGAGATGGAGGGTACTTGAGGTTACACTTGAACATAACCACCTTTTAGGTGCTAAGTTATACAGATCAATTAAGAAGATGGGAGTTGGAGCCAAACAGAAGCAACTACCTGGTTCTGATGACGAAGTTCGAACAATCAAGTTATACCGGGCACTTGTGATAGATGCAGCAGGTGATGTTAATGCAAACTCCAGTACTATAGAATTCAGGACTTCTTCAGAATCTTCCAGTAAGTTGAACCTTAAAAAAGGTGACACACAGGCCATTTATAACTACTTTTGTCGCATGCAACTGACCAATCCAAATTTCTTTTACTTGATGGATTTTAATGATGAAGGACTGTTGAGAAATGTATTTTGGGCTGATGCAAGGTCTAGGGCTGCGTGTGGCTATTTTGGTGATGTTATTTATTTGGACAACTCATATTTGTCAAACAAATATGAAATCCCTCTTGTGGCATTTGTTGGAATTAATCACCATGGTCAATCAGTGTTATTGGGCTGTGGTCTACTCGCTGGTGAAACATTAGAATCATATATATGGTTATTCAGAACATGGGTGACATGCATGTCAGGATCTCCTCCCCAAACTATTATCACTGATAGGTGCAAGGCCTTGCAGAATGCGATTGCAGAAGTTTTTCCAAGAACTTGTCATTGTTTTGGCTTGTCACTAATCATGAAAAGAGTACCAGAGAAGCTTGGAGGGTTACGTAATTATGATGCAATTAGGAAAGCACTGAGTAAAGCTGTTTATGAGACGTTGAAAGTAATTGAGTTTGAAGCAGCGTGGGGATTTATGATCCAGCGATTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACAGAGTTCATTGGGCTCCAGTATTCTTGAAGGACAAATTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAGACCTTGAGTCCTTTTTTTGAGAAATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATAAGAAGCACAAGGAAGAATCCGCTGCCGACATGGACTCGAGAGGCTCTACTCCCTTGCTGAAAACAAGATGTTCTTTTGAATTTCAGTTATCTAGAATGTTCACACGAGAAATATTCATGAAGTTCCAATATGAAGTTGAAGAAATGTATTCTTGTTTCAGTACCACACAGTTACACGTGGATGGCGCAATTATAATTTTCTTAGTCAAGGATCGTGTTTTAAGTGAAGGAAATAGAAGGGAGATCAAGGATTTTGAAGTCTTGTACAACAGGACTGCCGGTGAAGTTCGCTGCATCTGTAGCTGCTTTAACTTCAACGGGTATTTATGTAGGCATGCACTGTGCGTGCTCAATTTTAATGGGGTGGAGGAGATACCTTCCAGATACATTCTTTCCAGATGGAAAAAAGATTACAAGCGCCTACATGTTCCTGATCATAGCTCTGGTATTGTCGATGAGACCGATCGTATTCAATGGTTTAGTCAGTTATTTAGAAGCTCCTTGCAAGTTGTGGAAGAAGGGGCAATTTCTCTAGACCACTATAATGTAGCCTTGCATGCTTTTCAGGATTCTTTGAATAGGATACATGATGTAGAACAGAGACACGAGTAA 2061 0.4037 MGRIFMRVLEVKVLSLLALNMEDASICHEQVPDGDCIENQKEGGAITELDGQNGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRMKDVNHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKLYRSIKKMGVGAKQKQLPGSDDEVRTIKLYRALVIDAAGDVNANSSTIEFRTSSESSSKLNLKKGDTQAIYNYFCRMQLTNPNFFYLMDFNDEGLLRNVFWADARSRAACGYFGDVIYLDNSYLSNKYEIPLVAFVGINHHGQSVLLGCGLLAGETLESYIWLFRTWVTCMSGSPPQTIITDRCKALQNAIAEVFPRTCHCFGLSLIMKRVPEKLGGLRNYDAIRKALSKAVYETLKVIEFEAAWGFMIQRFGVCDHEWLRSIYEDRVHWAPVFLKDKFFAGMSAASPGETLSPFFEKYVHKQTPLKEFLDKYELALHKKHKEESAADMDSRGSTPLLKTRCSFEFQLSRMFTREIFMKFQYEVEEMYSCFSTTQLHVDGAIIIFLVKDRVLSEGNRREIKDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHVPDHSSGIVDETDRIQWFSQLFRSSLQVVEEGAISLDHYNVALHAFQDSLNRIHDVEQRHE 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1060 686 Pfam FAR1 DNA-binding domain 79 162 IPR004330 -
Prci13g1060 686 SMART 26again6 579 606 IPR006564 GO:0008270
Prci13g1060 686 Pfam MULE transposase domain 281 374 IPR018289 -
Prci13g1060 686 ProSiteProfiles Zinc finger SWIM-type profile. 568 604 IPR007527 GO:0008270
Prci13g1060 686 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 53 680 IPR031052 GO:0006355
Prci13g1060 686 Pfam SWIM zinc finger 578 600 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1060 Prci-Chr13 8865147 8869086 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1060 MULE 1.8e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1060 - K17604 gmx:100796448 1130.55