Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1058 ATGATCATGGAAGATGCCTCCATTTGCCATGAACAAGTGCCAGATGGTGATTGCATTGAGAATCAGAAAGAAGGTGGTGCAATAACTGAATTAGATGGTCAAAATGGGTTTTCTGAAGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGGATGGAGTTTGAGTCCTACGATGATGCGTACAATTATTATATCTGCTATGCCAAGGAGGTGGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAGTATGGTGCAGTGCTGTGCTGTAGCAGTCAGGGTTTTAAAAGAATGAAAGATGTTAACCATTTAAGAAAGGAAACAAGAACTGGTTGCCCTGCAATGATAAGGATGAGGTTAGTGGACTCTCAGAGATGGAGGGTACTTGAGGTTACACTTGAACATAACCACCTTTTAGGTGCTAAGTTATACAGATCAATTAAGAAGATGGGAGTTGGAGCCAAACAGAAGCAACTACCTGGTTCTGATGACGAAGTTCGAACAATCAAGTTATACCGGGCACTTGTGATAGATGCAGCAGGTGATGTTAATGCAAACTCCAGTACTATAGAATTCAGGACTTCTTCAGAATCTTCCAGTAAGTTGAACCTTAAAAAAGGTGACACACAGGCCATTTATAACTACTTTTGTCGCATGCAACTGACCAATCCAAATTTCTTTTACTTGATGGATTTTAATGATGAAGGACTGTTGAGAAATGTATTTTGGGCTGATGCAAGGTCTAGGGCTGCGTGTGGCTATTTTGGTGATGTTATTTATTTGGACAACTCATATTTGTCAAACAAATATGAAATCCCTCTTGTGGCATTTGTTGGAATTAATCACCATGGTCAATCAGTGTTATTGGGCTGTGGTCTACTCGCTGGTGAAACATTAGAATCATATATATGGTTATTCAGAACATGGGTGACATGCATGTCAGGATCTCCTCCCCAAACTATTATCACTGATAGGTGCAAGGCCTTGCAGAATGCGATTGCAGAAGTTTTTCCAAGAACTTGTCATTGTTTTGGCTTGTCACTAATCATGAAAAGAGTACCAGAGAAGCTTGGAGGGTTACGTAATTATGATGCAATTAGGAAAGCACTGAGTAAAGCTGTTTATGAGACGTTGAAAGTAATTGAGTTTGAAGCAGCGTGGGGATTTATGATCCAGCGATTTGGAGTTTGTGATCATGAGTGGCTTCGTTCTATCTATGAAGACAGAGTTCATTGGGCTCCAGTATTCTTGAAGGACAAATTTTTTGCTGGAATGTCTGCAGCAAGTCCTGGTGAGACCTTGAGTCCTTTTTTTGAGAAATATGTGCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTCATAAGAAGCACAAGGAAGAATCCGCTGCCGACATGGACTCGAGAGGCTCTACTCCCTTGCTGAAAACAAGATGTTCTTTTGAATTTCAGTTATCTAGAATGTTCACACGAGAAATATTCATGAAGTTCCAATATGAAGTTGAAGAAATGTATTCTTGTTTCAGTACCACACAGTTACACGTGGATGGCGCAATTATAATTTTCTTAGTCAAGGATCGTGTTTTAAGTGAAGGAAATAGAAGGGAGATCAAGGATTTTGAAGTCTTGTACAACAGGACTGCCGGTGAAGTTCGCTGCATCTGTAGCTGCTTTAACTTCAACGGGTATTTATGTAGGCATGCACTGTGCGTGCTCAATTTTAATGGGGTGGAGGAGATACCTTCCAGATACATTCTTTCCAGATGGAAAAAAGATTACAAGCGCCTACATGTTCCTGATCATAGCTCTGGTATTGTCGATGAGACCGATCGTATTCAATGGTTTAGTCAGTTATTTAGAAGCTCCTTGCAAGTTGTGGAAGAAGGGGCAATTTCTCTAGACCACTATAATGTAGCCTTGCATGCTTTTCAGGATTCTTTGAATAGGATACATGATGTAGAACAGAGACACGAGTAA 2007 0.4031 MIMEDASICHEQVPDGDCIENQKEGGAITELDGQNGFSEGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRMKDVNHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKLYRSIKKMGVGAKQKQLPGSDDEVRTIKLYRALVIDAAGDVNANSSTIEFRTSSESSSKLNLKKGDTQAIYNYFCRMQLTNPNFFYLMDFNDEGLLRNVFWADARSRAACGYFGDVIYLDNSYLSNKYEIPLVAFVGINHHGQSVLLGCGLLAGETLESYIWLFRTWVTCMSGSPPQTIITDRCKALQNAIAEVFPRTCHCFGLSLIMKRVPEKLGGLRNYDAIRKALSKAVYETLKVIEFEAAWGFMIQRFGVCDHEWLRSIYEDRVHWAPVFLKDKFFAGMSAASPGETLSPFFEKYVHKQTPLKEFLDKYELALHKKHKEESAADMDSRGSTPLLKTRCSFEFQLSRMFTREIFMKFQYEVEEMYSCFSTTQLHVDGAIIIFLVKDRVLSEGNRREIKDFEVLYNRTAGEVRCICSCFNFNGYLCRHALCVLNFNGVEEIPSRYILSRWKKDYKRLHVPDHSSGIVDETDRIQWFSQLFRSSLQVVEEGAISLDHYNVALHAFQDSLNRIHDVEQRHE 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1058 668 Pfam FAR1 DNA-binding domain 61 144 IPR004330 -
Prci13g1058 668 Pfam MULE transposase domain 263 356 IPR018289 -
Prci13g1058 668 SMART 26again6 561 588 IPR006564 GO:0008270
Prci13g1058 668 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Prci13g1058 668 Pfam SWIM zinc finger 560 582 IPR007527 GO:0008270
Prci13g1058 668 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 662 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1058 Prci-Chr13 8865147 8869086 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci13g1058 MULE 1.7e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1058 - K17604 gmx:100796448 1130.55