Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1056 ATGGCCGTTGTTTCTTTCTCTTTTCGACCTTATCTTCATCCCTCCTCTGCTTGTTCTTCTTCTTCTTCTTCGTCGTCGTCGTCGTCGTCTTATTTGTGTGGTGGTGTCCATCTTCGGACCCATAAGAACTTCATTTCTATTCATTCACCTTCTTATTTTTCTTCTTCGACATTAAATAATAAGTCCTCCTCGAGGACCTTCCGAACGGCGATTGCTGCTTCTGGCGACTATTATGCTACTCTTGGAGTCTCCAAATCCGCGACTAACAAGGAGATTAAGGCGGCTTATCGAAAGTTAGCTCGTCAGTATCATCCTGATGTGAACAAGGAACCTGGAGCTATTGACAAGTTCAAGGAAATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATATGGAGAGGCTGGAGTTAAGAGTACGGTAGGAGGAGCATCAAATGCTTATACGGCCAATCCATTTGATTTGTTTGAGACATTTTTTGGGCCAAGTATGGGTGGCTTTGCTGGCATGGATCCAACTGGATTTGGAACACGTCGCCGTAGTACTGTTACTAAGGGTGAAGACATTCGTTATGATCTTTTGTTGCAATTTTCTGAGGCAATTTTTGGAGCTGAAAAGGAATTTGAGCTTTCCCATTTGGAAAAATGTGAAGCTTGTAACGGTACTGGAGCAAAGATTGGCTCCAAGATGAGAATATGTTCGACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGTTTGTTCTCACAGGTTTCAGTATGTCCAAACTGTGGAGGCGTTGGTGAAGTCATATCTGAATTCTGTCGTAAATGTAATAGTGAAGGACGTATTCGGGTTAAGAAAAATATTAAAGTGAAAGTTCCTCCAGGGGTGAGCTCGGGCAGCATTCTGAGAGTTGCTGGGGAGGGTGATGCTGGACCTCGAGCGGGTCCTCCTGGAGATCTATTTGTGTATCTTGAAGTGGAAGAGATTCCGGGAATTCAAAGAGATGGCATTAATCTCTCTTCAACGATAACAATCAGTTATCTAGATGCCATACTAGGTGTTGTTATCAAGGTAAATACAGTTGAAGGCATTTCTGAACTACAAATACCCCCTGGTACCCAACCTGGAGATGTCATTGTCCTTCAAAGGAAAGGCGCACCAAAATTAAACAAACCATCAATACGTGGTGACCACTTATTTACAGTTAAAGTTACAATACCAAAACGTATCAGTTTAAAGGAGCGTGAGTTGCTTGAAGAACTTGCTTCACGAGGCAGCAAAACAAGTAGCCGTTCAAAACCACGTCCTAGCATTCGCTCTTCAAAGGGAAGGGCTGAAGACCCTGTATTTCAAAGTGCTGAAAGTCCAACAGTGGTTGAAGAAAAAACTGAACGGTCAGAAGACCAAGATGACATATGGAAGAAATTAAAGAATTTTGCTGGGTCCGTCGCAAATGGAGCTCTGAAGTGGCTAGAAGATAACCTGAAGTAG 1512 0.4306 MAVVSFSFRPYLHPSSACSSSSSSSSSSSSYLCGGVHLRTHKNFISIHSPSYFSSSTLNNKSSSRTFRTAIAASGDYYATLGVSKSATNKEIKAAYRKLARQYHPDVNKEPGAIDKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGASNAYTANPFDLFETFFGPSMGGFAGMDPTGFGTRRRSTVTKGEDIRYDLLLQFSEAIFGAEKEFELSHLEKCEACNGTGAKIGSKMRICSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGVGEVISEFCRKCNSEGRIRVKKNIKVKVPPGVSSGSILRVAGEGDAGPRAGPPGDLFVYLEVEEIPGIQRDGINLSSTITISYLDAILGVVIKVNTVEGISELQIPPGTQPGDVIVLQRKGAPKLNKPSIRGDHLFTVKVTIPKRISLKERELLEELASRGSKTSSRSKPRPSIRSSKGRAEDPVFQSAESPTVVEEKTERSEDQDDIWKKLKNFAGSVANGALKWLEDNLK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1056 503 SUPERFAMILY HSP40/DnaJ peptide-binding domain 191 343 IPR008971 GO:0006457|GO:0051082
Prci13g1056 503 PRINTS DnaJ domain signature 78 96 IPR001623 -
Prci13g1056 503 PRINTS DnaJ domain signature 96 111 IPR001623 -
Prci13g1056 503 PRINTS DnaJ domain signature 132 151 IPR001623 -
Prci13g1056 503 PRINTS DnaJ domain signature 112 132 IPR001623 -
Prci13g1056 503 Gene3D DnaJ domain 73 178 IPR036869 -
Prci13g1056 503 Pfam DnaJ C terminal domain 196 414 IPR002939 -
Prci13g1056 503 FunFam Chaperone protein dnaJ A6 chloroplastic 223 287 - -
Prci13g1056 503 CDD DnaJ 76 129 IPR001623 -
Prci13g1056 503 ProSiteProfiles dnaJ domain profile. 76 140 IPR001623 -
Prci13g1056 503 ProSiteProfiles Zinc finger CR-type profile. 210 292 IPR001305 GO:0031072|GO:0051082
Prci13g1056 503 Gene3D - 193 329 - -
Prci13g1056 503 FunFam Molecular chaperone Hsp40/DnaJ family protein 339 431 - -
Prci13g1056 503 FunFam Putative Mitochondrial DnaJ chaperone 280 329 - -
Prci13g1056 503 Hamap Chaperone protein DnaJ [dnaJ]. 73 486 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci13g1056 503 SMART dnaj_3 75 132 IPR001623 -
Prci13g1056 503 SUPERFAMILY HSP40/DnaJ peptide-binding domain 340 425 IPR008971 GO:0006457|GO:0051082
Prci13g1056 503 SUPERFAMILY Chaperone J-domain 74 182 IPR036869 -
Prci13g1056 503 Pfam DnaJ central domain 223 287 IPR001305 GO:0031072|GO:0051082
Prci13g1056 503 CDD DnaJ_zf 223 287 IPR001305 GO:0031072|GO:0051082
Prci13g1056 503 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 25 438 - -
Prci13g1056 503 FunFam Chaperone protein dnaJ A6 chloroplastic 73 179 - -
Prci13g1056 503 Gene3D - 223 287 - -
Prci13g1056 503 NCBIfam molecular chaperone DnaJ 76 430 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci13g1056 503 CDD DnaJ_C 194 417 - -
Prci13g1056 503 MobiDBLite consensus disorder prediction 428 478 - -
Prci13g1056 503 Gene3D - 339 431 - -
Prci13g1056 503 ProSitePatterns Nt-dnaJ domain signature. 117 136 IPR018253 -
Prci13g1056 503 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 290 IPR036410 -
Prci13g1056 503 Pfam DnaJ domain 76 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1056 Prci-Chr13 8842118 8849196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1056 77 183 C2H2 Transcription Factor Family AT1G74250 36.975 3.23e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1056 K03686 - gmx:100798567 723.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1056 13 8842118 8849196 Prci13g1056 13 8842118 8849196 ECH