Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1054 ATGTACAGAGGGGTTCGAATGAGGGCGTGGGGCAAGTGGGTGCTAAAAATCCAGGAGCCCAGGAAAAAGAACTGGAGCTGGCTCGGCACCTTCGCCACGCCGGAGATGGACGACTTTCACCTCGCGATCACTCTTATTTTCCTCTTCGTCGTCGTCATTGGCAATGTCCTCTTCCTCCTTTGGCGACCGTCCATTTCGAAAGAACTGGGCGAGATGGTGGAGATGCCGCCTCTGGAGAGCAGCTTCGAGATAGGTGGAGAGATAGTAGTAACAGGAGATGAGAGAGCTCTTTGGCCAGAAATGCAGCCACCGTCGATGAAGGAGGGAGATGCTTAG 336 0.5417 MYRGVRMRAWGKWVLKIQEPRKKNWSWLGTFATPEMDDFHLAITLIFLFVVVIGNVLFLLWRPSISKELGEMVEMPPLESSFEIGGEIVVTGDERALWPEMQPPSMKEGDA 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1054 111 ProSiteProfiles AP2/ERF domain profile. 1 35 IPR001471 GO:0003700|GO:0006355
Prci13g1054 111 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 36 - -
Prci13g1054 111 Gene3D AP2/ERF domain 1 37 IPR036955 GO:0003700|GO:0006355
Prci13g1054 111 SMART rav1_2 1 50 IPR001471 GO:0003700|GO:0006355
Prci13g1054 111 SUPERFAMILY DNA-binding domain 2 36 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1054 Prci-Chr13 8815956 8816382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1054 2 36 AP2-EREBP Transcription Factor Family AT1G77200 77.143 5.81e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1054 K09286 - lja:Lj1g3v4809900.1 70.8626