Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1052 ATGATGCTGCTCTTTCTTTGTCTCCCAGTACTCCAGCTCCTACCTCTCATGTTTTATCCTCATCTTGCTCTGTCTTTCACGACCATCATGTCAGATTCTGGCGGCGCGCCTTCATCTCTAGTCGACGGCCCTCAGACCGGGTTCTCCATGAAGCAGGACGGCGCTCGAACCGACGCTCACGAGCAAGAAGCGGTTTACGACATCATGCGAGCCACCGGCAACGACTGGGCCTCCGATATCCCCGACGTGTGTCGTGGCCGGTGGCACGGGATCGAGTGCATGCCCGACAAGGACAACGTTTACCATGTCGTGTCACTCTCCTTCGGAGCGCTCTCTGACGACACGGCTTTCCCTACATGCGACCCGACCCGGTCCTACCTTTCACGGTCCGTCACTAAGCTGCCCCACCTCAAGACCCTCTTCTTTTACCGTTGTTTCAGTTACAATCCTCAGCCAATCCCTGCTTTTTTAGGCAAGCTGGGCCCCACGCTACAAACATTAGTCCTCAGAGAAAACGGGCACGTGGGTCCCATCCCGAACGAACTGGGTAATCTGACCCGTTTGAGAGTGCTGGATCTTCACAACAACGACCTCAACGGTTCAATACCGTCGTCCCTGAACCGGATCCCCGGTTTAAGGTCGCTAGACCTAAGCGGCAACAGATTAACCGGGCCCATACCCGATTTAACGTGCCCTTCCCTAGACATACTGGACCTGGGCGAGAATCTTCTGACCGGCCCAATACCATCCACCCTAGGAACCTGCCTTTCTCTCATCAAACTGGATCTCAGCCACAACCACCTTACCGGACCGATACCAGAGAAAATCAACGGCCTGAAAGAGCTCATGCTAATGGACCTGAGCTACAACCTTCTCTCAGGCCCATTCCCAAAATCCCTGAAAAGCTTGAGTTCTCTTCAGGCCCTCATTCTGAAAGGTAACCCAATGGGTCCAGGCCCAACAACAATTCCCACTGACTTGTTTGACGGCATGGCGAAACTTATGACCTTAGTGTTATCAAACATGAACCTGCACGGCCCAATACCAGAATCACTGGGCAGATTACAAAGCCTTCGTGTGGTTCATCTTGACGGGAATTTACTAAACGGGTCGGTCCCGAAGAGCTTGAAGGAGCTGAAGAATCTGAGCGAGCTGAGGCTGAATGATAATAGGCTAAGTGGGTCAGTCCCATTTAGCAGAGAGATGGTGTGGAGGATGAAGAGGAAGCTAAGGCTGTACAATAACTCTGGTCTGTGTTATGATCAGAAAAGTGGGTTCAGGGACAGTGAAGACTCTACTCTCAATAATTATGGCATCGAGATGTGTGATGAGAGTTCAAGTGGTGGTTCAGGAGGAGGAGGAGGATCACTTGGGACAGTGCAGCATCTTTCATCAGTGACTCATCAGAAGTCATCAGAGCCAACAACAACAACAACAACAACCACATATGTTTCATCGGATGCTGTTCTTGCGGATGCAGTTACAAGGTTGTTGGGACTAACTTCACTTCTTCTCTTCACTTTGATTTTATTCCTGGGTCAATCTCAAGTTCGGATTTTTGTTTACTTCTTGGGTTCGACTGAGAGGTCAGAGGGTTCGGAGAAGTTATCAACAGAGAAATACGAGAAGGTGGGACTGATTGGTTGCAAGGGTATGGCTTTTTGCCCAATCTTTTGTTGTGGAAGGGGTTCGGATCGCAAAGCGCGAGGGAAGTCACAACAACCACCATGGCGAGTCTTTTCCTTAAAGGAGCTGCACTCAGCTACAAATAATTTCAACTATGATAATAAACTTGGAGAAGGGGGATTTGGCAGTGTTTACTGGGGCCAGCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTGTTGAAGTTGAGATATTGGCAAGAGTTCGACACAAGAATCTTCTTAGTCTGCGAGGCTATTGTGCTGAAGGGCAGGAACGGTTAATTGTATATGACTATATGCCAAATCTGAGCTTACTCTCTCATCTTCATGGACAGCACTCAGCAGAATCCCTGCTGAATTGGAGCAGACGGATGAGTATTGCAATTGGATCAGCAGAGGGAATTGCATATCTCCACCACCAAGCAACTCCACACATCATCCACAGAGATATTAAAGCGAGCAATGTTCTCTTGGATGCAGATTTCCAGGCTCAGGTTGCAGATTTTGGTTTTGCTAAGTTAATCCCTGAGGGGGCAACACATGTGACTACAAAGGTCAAGGGCACCCTAGGCTATCTTGCACCGGAGTACGCTATGTTGGGTAAAGCATCTGAGAGTTGTGATGTCTTCAGTTTTGGAATTCTCTTGCTGGAACTTGCAACTGGAAGGAAACCAATTGAAAAACTGAGTGCAACAGTGAAGCGGTCAATAACTGATTGGGCACTACCATTGGTTTTTGAGAAGAAATTTAGTGAAATTGCAGATCCAAGACTAAGTGGTGACTATGTGGATGAAGAGCTTAAAAGGGTTGTTTATGTTGCACTTGTTTGTGCTCAGAATCAGCCTGAGAAGAGACCCAACATGCTGGAGGTGGTAGAGCTGCTGAAGGGAGAATCTAAAGTGAAGTTCTCTCAGCTAGAGAATCATGAACTTTTTAGAAGCCCTCAACCTGCTGATTCCAACGATGACAAGATACAAGCTGCCGAAGATAGTTCCGACTTTATAACAGCAGAGAATGAATCAAAACCAGAGTTGAAGGAGAATCCTGGGCCATAA 2760 0.479 MMLLFLCLPVLQLLPLMFYPHLALSFTTIMSDSGGAPSSLVDGPQTGFSMKQDGARTDAHEQEAVYDIMRATGNDWASDIPDVCRGRWHGIECMPDKDNVYHVVSLSFGALSDDTAFPTCDPTRSYLSRSVTKLPHLKTLFFYRCFSYNPQPIPAFLGKLGPTLQTLVLRENGHVGPIPNELGNLTRLRVLDLHNNDLNGSIPSSLNRIPGLRSLDLSGNRLTGPIPDLTCPSLDILDLGENLLTGPIPSTLGTCLSLIKLDLSHNHLTGPIPEKINGLKELMLMDLSYNLLSGPFPKSLKSLSSLQALILKGNPMGPGPTTIPTDLFDGMAKLMTLVLSNMNLHGPIPESLGRLQSLRVVHLDGNLLNGSVPKSLKELKNLSELRLNDNRLSGSVPFSREMVWRMKRKLRLYNNSGLCYDQKSGFRDSEDSTLNNYGIEMCDESSSGGSGGGGGSLGTVQHLSSVTHQKSSEPTTTTTTTTYVSSDAVLADAVTRLLGLTSLLLFTLILFLGQSQVRIFVYFLGSTERSEGSEKLSTEKYEKVGLIGCKGMAFCPIFCCGRGSDRKARGKSQQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGQHSAESLLNWSRRMSIAIGSAEGIAYLHHQATPHIIHRDIKASNVLLDADFQAQVADFGFAKLIPEGATHVTTKVKGTLGYLAPEYAMLGKASESCDVFSFGILLLELATGRKPIEKLSATVKRSITDWALPLVFEKKFSEIADPRLSGDYVDEELKRVVYVALVCAQNQPEKRPNMLEVVELLKGESKVKFSQLENHELFRSPQPADSNDDKIQAAEDSSDFITAENESKPELKENPGP 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1052 919 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 330 399 - -
Prci13g1052 919 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 69 891 - -
Prci13g1052 919 Gene3D Transferase(Phosphotransferase) domain 1 668 880 - -
Prci13g1052 919 SMART LRR_typ_2 355 378 IPR003591 -
Prci13g1052 919 SMART LRR_typ_2 209 233 IPR003591 -
Prci13g1052 919 SMART LRR_typ_2 185 208 IPR003591 -
Prci13g1052 919 SMART LRR_typ_2 379 402 IPR003591 -
Prci13g1052 919 SMART LRR_typ_2 303 330 IPR003591 -
Prci13g1052 919 ProSitePatterns Serine/Threonine protein kinases active-site signature. 714 726 IPR008271 GO:0004672|GO:0006468
Prci13g1052 919 SUPERFAMILY Protein kinase-like (PK-like) 572 863 IPR011009 -
Prci13g1052 919 CDD STKc_IRAK 598 865 - -
Prci13g1052 919 FunFam Piriformospora indica-insensitive protein 2 60 227 - -
Prci13g1052 919 ProSiteProfiles Leucine-rich repeat profile. 211 233 IPR001611 GO:0005515
Prci13g1052 919 SMART serkin_6 592 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1052 919 Gene3D Phosphorylase Kinase; domain 1 562 667 - -
Prci13g1052 919 Pfam Protein kinase domain 593 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1052 919 FunFam PTI1-like tyrosine-protein kinase At3g15890 563 667 - -
Prci13g1052 919 Pfam Leucine rich repeat 258 315 IPR001611 GO:0005515
Prci13g1052 919 Pfam Leucine rich repeat 162 222 IPR001611 GO:0005515
Prci13g1052 919 ProSiteProfiles Protein kinase domain profile. 592 880 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g1052 919 Gene3D Ribonuclease Inhibitor 323 425 IPR032675 -
Prci13g1052 919 Gene3D Ribonuclease Inhibitor 61 230 IPR032675 -
Prci13g1052 919 Gene3D Ribonuclease Inhibitor 231 322 IPR032675 -
Prci13g1052 919 FunFam PTI1-like tyrosine-protein kinase At3g15890 668 879 - -
Prci13g1052 919 MobiDBLite consensus disorder prediction 891 919 - -
Prci13g1052 919 FunFam Piriformospora indica-insensitive protein 2 229 321 - -
Prci13g1052 919 MobiDBLite consensus disorder prediction 879 919 - -
Prci13g1052 919 ProSitePatterns Protein kinases ATP-binding region signature. 598 620 IPR017441 GO:0005524
Prci13g1052 919 SUPERFAMILY L domain-like 86 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1052 Prci-Chr13 8785054 8792900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1052 153 864 Receptor kinase-like Gene Family AT5G07280 34.959 9.77e-110 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Prci13g1052 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1052 - - pcin:129289859 1752.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1052 13 8785054 8792900 Prci13g1052 13 8785054 8792900 ECH