Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1033 ATGGCGCAAATTTTGCTCCATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTGAAGACGGGCGGCGGCGGCAATATCTTCAACAAGCTCAAGGAAAATCTTGAGGAGGCGGTTGGTTTTGGAAAGGGAGTTACTAAACTCTATGCAACCATTGATCTTGAGAAGGCCAGAGTTGGAAGGACTAGAATTATAGAAAATGAACATTCCAACCCTAGGTGGTATGAGTCTTTTCACATTTATTGTGCTCACATGGCTTCTGATATTATCTTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGAGCACATGTGCCTGTTACGGATGTCTTGGATGGTGATGAAATAGATAGGTGGGTTGAAATCTTGGACGAGAACAAGAATCCCATTCGTGGTGATTCAAAAATCCATGTGAAACTGCAATATTTTGATGTCACCAAAGAACGCAGCTGGGGTCGGGGTATTCGAAGTGCCAAATTTCCCGGAGTTCCATACACTTTCTTCTCACAGAGGCAAGGATGCAAGATCTCTCTGTACCAAGATGCTCATATCCCAGAGAAATTTGTCCCTAAAATATCTCTTGCTGGAGGTGAGAAATATGTTGCTCATAGATGTTGGGAGGATGTTTTCGATGCAATCACTAATGCCAAGCACTTAATATACATTACTGGTTGGTCTGTATATACTGAGATCTCCTTGGTGAGGGATAACAGGATTGCAAAGCCAGGGGGAAACATAAAACTTGGTGAGCTCCTCAAGAGAAAGGCAAGTGAAGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTGAAAAAAGATGGATTGATGGCTACTCATGATGAAGAAACTGAGCATTACTTCCATGACACTGCTGTGCATTGTGTTTTATGCCCCCGCAATCCTGACGACGGGGGAAGCATTATTCAGGACTTGCAAATTTCTACCATGTTCACCCATCACCAGAAGATTGTTGTGGTGGACAGTGAGTTGCCAAGTGGAGGATCAGACCAGCGACGGATTGTTAGTTTTGTTGGGGGTATTGATCTTTGTGATGGTAGGTACGATACTCCCTTCCATTCACTGTTCAGAACCCTGGACTCAGCGCACCTTAATGACTTTCACCAACCCAACTTTCCTGGCGCTGTGATCACAAAAGGTGGTCCCAGGGAACCTTGGCATGACATTCATTCCCGGCTTGAAGGACCCATTGCTTGGGATGTTTTATTTAACTTTGAACAAAGATGGAGGAAGCAAGGTGGGAAGGATGTACTTGTTCAGTTGAGGGAACTTCAAGATGTCATCATTCCTCCGTCCCCAGTTATGTTTCCTGATGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGGCGGGGCTGCTTTTGGGTTTCCAGAGACTCCTGAAGATGCTGCCAAAGCTGGGCTCATTAGTGGGAAGGATAATATTATTGATCGTAGTATTCAAGATGCTTATATTAATGCCATTCGACGAGCAAAGGATTTCATCTATATTGAAAATCAGTACTTCCTCGGGAGCTCTTTTGCTTGGAGCGCTGATGATATCAAGCCTGAGGACATAAATGCTTTGCATGTCATCCCAAAGGAGCTTTCACTTAAAATCGTCAGTAAGATTGAAGCTGGGGAGAGATTCACTGTATATGTTGTGGTCCCCATGTGGCCAGAGGGTATCCCAGAAAGCGCATCTGTGCAGGCAATATTGGACTGGCAGAGGAGGACAATGGAGATGATGTACAAAGATGTAATTCAGGCACTAAGGGCCAATGGAATTGAGGACGATCCTCGTAACTATTTGACATTCTTCTGCCTTGGTAACCGAGAGTTGAAGAAAGATGGAGAGTATACACCTGCAGAAAGACCAGATCCTGATTCTGATTATCTGAGAGCTCAAGAGGCTCGGCGCTTCATGATATATGTTCATGCCAAGATGATGATAGTTGATGATGAGTACATAATCATAGGATCTGCCAACATCAACCAGAGATCAATGGATGGCGCCAGAGACTCAGAGATTGCCATGGGTGCTTATCAACCCTATCATTTAGCTCACAGACAACCTGCACGCGGCCAGATCCATGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGTATGCTGGACGATTCCTTCTTTCATCCTGAAAGTGAAGAATGTGTCAGGAAGGTGAACCAGATGGCTGACAAATACTGGGACCTCTATTCGAGTGAGTCGCTGGAACGCGACCTTCCTGGACACTTGCTTCGATATCCTGTAGGGATATCTGAAGGAGGAGAAATCTCAGAGCTGCCAGGATTTGAATTTTTCCCTGACACCAAGGCTCGTGTTCTTGGTGCCAAAGCTGACTACATGCCTCCAATCCTTACAACTTAG 2427 0.4471 MAQILLHGTLHVTIFEVDRLKTGGGGNIFNKLKENLEEAVGFGKGVTKLYATIDLEKARVGRTRIIENEHSNPRWYESFHIYCAHMASDIIFTVKDDNPIGATLIGRAHVPVTDVLDGDEIDRWVEILDENKNPIRGDSKIHVKLQYFDVTKERSWGRGIRSAKFPGVPYTFFSQRQGCKISLYQDAHIPEKFVPKISLAGGEKYVAHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDNRIAKPGGNIKLGELLKRKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEHYFHDTAVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSELPSGGSDQRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHLNDFHQPNFPGAVITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVQLRELQDVIIPPSPVMFPDDHETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSSFAWSADDIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKDVIQALRANGIEDDPRNYLTFFCLGNRELKKDGEYTPAERPDPDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAHRQPARGQIHGFRMSLWYEHLGMLDDSFFHPESEECVRKVNQMADKYWDLYSSESLERDLPGHLLRYPVGISEGGEISELPGFEFFPDTKARVLGAKADYMPPILTT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1033 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci13g1033 808 SMART pld_4 326 364 IPR001736 GO:0003824
Prci13g1033 808 SMART pld_4 654 681 IPR001736 GO:0003824
Prci13g1033 808 Gene3D Endonuclease Chain A 200 443 - -
Prci13g1033 808 Pfam C2 domain 8 127 IPR000008 -
Prci13g1033 808 SMART C2_3c 9 124 IPR000008 -
Prci13g1033 808 CDD PLDc_pPLDalpha_2 492 701 - -
Prci13g1033 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Prci13g1033 808 Gene3D Endonuclease Chain A 479 700 - -
Prci13g1033 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 150 IPR035892 -
Prci13g1033 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824
Prci13g1033 808 FunFam Phospholipase D delta 201 444 - -
Prci13g1033 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Prci13g1033 808 FunFam Phospholipase D 467 700 - -
Prci13g1033 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824
Prci13g1033 808 Gene3D C2 domain 6 156 IPR035892 -
Prci13g1033 808 PANTHER PHOSPHOLIPASE D 4 796 IPR015679 -
Prci13g1033 808 SUPERFAMILY Phospholipase D/nuclease 152 446 - -
Prci13g1033 808 Pfam Phospholipase D Active site motif 326 364 IPR001736 GO:0003824
Prci13g1033 808 Pfam Phospholipase D Active site motif 655 681 IPR001736 GO:0003824
Prci13g1033 808 SUPERFAMILY Phospholipase D/nuclease 445 738 - -
Prci13g1033 808 CDD C2_plant_PLD 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1033 Prci-Chr13 8649404 8653545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g1033 1 808 Phospholipase D Gene Family (Wang group) AT3G15730 80.370 0.0 1394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1033 K01115 - gmx:100786410 1482.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1033 13 8649404 8653545 Prci12g1840 12 36144023 36147511 CCT
Prci12g1840 12 36144023 36147511 Prci13g1033 13 8649404 8653545 ECH
Prci15g1005 15 6257423 6260953 Prci13g1033 13 8649404 8653545 ECH
Prci13g1033 13 8649404 8653545 Prci13g1033 13 8649404 8653545 ECH