Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci13g1033 | ATGGCGCAAATTTTGCTCCATGGGACTCTCCATGTCACGATCTTTGAGGTGGATAGGCTGAAGACGGGCGGCGGCGGCAATATCTTCAACAAGCTCAAGGAAAATCTTGAGGAGGCGGTTGGTTTTGGAAAGGGAGTTACTAAACTCTATGCAACCATTGATCTTGAGAAGGCCAGAGTTGGAAGGACTAGAATTATAGAAAATGAACATTCCAACCCTAGGTGGTATGAGTCTTTTCACATTTATTGTGCTCACATGGCTTCTGATATTATCTTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGAGCACATGTGCCTGTTACGGATGTCTTGGATGGTGATGAAATAGATAGGTGGGTTGAAATCTTGGACGAGAACAAGAATCCCATTCGTGGTGATTCAAAAATCCATGTGAAACTGCAATATTTTGATGTCACCAAAGAACGCAGCTGGGGTCGGGGTATTCGAAGTGCCAAATTTCCCGGAGTTCCATACACTTTCTTCTCACAGAGGCAAGGATGCAAGATCTCTCTGTACCAAGATGCTCATATCCCAGAGAAATTTGTCCCTAAAATATCTCTTGCTGGAGGTGAGAAATATGTTGCTCATAGATGTTGGGAGGATGTTTTCGATGCAATCACTAATGCCAAGCACTTAATATACATTACTGGTTGGTCTGTATATACTGAGATCTCCTTGGTGAGGGATAACAGGATTGCAAAGCCAGGGGGAAACATAAAACTTGGTGAGCTCCTCAAGAGAAAGGCAAGTGAAGGTGTCAGGGTTTTAATGCTTGTTTGGGATGATAGAACATCTGTTGGTTTGTTGAAAAAAGATGGATTGATGGCTACTCATGATGAAGAAACTGAGCATTACTTCCATGACACTGCTGTGCATTGTGTTTTATGCCCCCGCAATCCTGACGACGGGGGAAGCATTATTCAGGACTTGCAAATTTCTACCATGTTCACCCATCACCAGAAGATTGTTGTGGTGGACAGTGAGTTGCCAAGTGGAGGATCAGACCAGCGACGGATTGTTAGTTTTGTTGGGGGTATTGATCTTTGTGATGGTAGGTACGATACTCCCTTCCATTCACTGTTCAGAACCCTGGACTCAGCGCACCTTAATGACTTTCACCAACCCAACTTTCCTGGCGCTGTGATCACAAAAGGTGGTCCCAGGGAACCTTGGCATGACATTCATTCCCGGCTTGAAGGACCCATTGCTTGGGATGTTTTATTTAACTTTGAACAAAGATGGAGGAAGCAAGGTGGGAAGGATGTACTTGTTCAGTTGAGGGAACTTCAAGATGTCATCATTCCTCCGTCCCCAGTTATGTTTCCTGATGATCATGAGACATGGAATGTTCAGTTATTTAGATCTATTGATGGCGGGGCTGCTTTTGGGTTTCCAGAGACTCCTGAAGATGCTGCCAAAGCTGGGCTCATTAGTGGGAAGGATAATATTATTGATCGTAGTATTCAAGATGCTTATATTAATGCCATTCGACGAGCAAAGGATTTCATCTATATTGAAAATCAGTACTTCCTCGGGAGCTCTTTTGCTTGGAGCGCTGATGATATCAAGCCTGAGGACATAAATGCTTTGCATGTCATCCCAAAGGAGCTTTCACTTAAAATCGTCAGTAAGATTGAAGCTGGGGAGAGATTCACTGTATATGTTGTGGTCCCCATGTGGCCAGAGGGTATCCCAGAAAGCGCATCTGTGCAGGCAATATTGGACTGGCAGAGGAGGACAATGGAGATGATGTACAAAGATGTAATTCAGGCACTAAGGGCCAATGGAATTGAGGACGATCCTCGTAACTATTTGACATTCTTCTGCCTTGGTAACCGAGAGTTGAAGAAAGATGGAGAGTATACACCTGCAGAAAGACCAGATCCTGATTCTGATTATCTGAGAGCTCAAGAGGCTCGGCGCTTCATGATATATGTTCATGCCAAGATGATGATAGTTGATGATGAGTACATAATCATAGGATCTGCCAACATCAACCAGAGATCAATGGATGGCGCCAGAGACTCAGAGATTGCCATGGGTGCTTATCAACCCTATCATTTAGCTCACAGACAACCTGCACGCGGCCAGATCCATGGTTTCCGCATGTCATTGTGGTATGAGCACCTTGGTATGCTGGACGATTCCTTCTTTCATCCTGAAAGTGAAGAATGTGTCAGGAAGGTGAACCAGATGGCTGACAAATACTGGGACCTCTATTCGAGTGAGTCGCTGGAACGCGACCTTCCTGGACACTTGCTTCGATATCCTGTAGGGATATCTGAAGGAGGAGAAATCTCAGAGCTGCCAGGATTTGAATTTTTCCCTGACACCAAGGCTCGTGTTCTTGGTGCCAAAGCTGACTACATGCCTCCAATCCTTACAACTTAG | 2427 | 0.4471 | MAQILLHGTLHVTIFEVDRLKTGGGGNIFNKLKENLEEAVGFGKGVTKLYATIDLEKARVGRTRIIENEHSNPRWYESFHIYCAHMASDIIFTVKDDNPIGATLIGRAHVPVTDVLDGDEIDRWVEILDENKNPIRGDSKIHVKLQYFDVTKERSWGRGIRSAKFPGVPYTFFSQRQGCKISLYQDAHIPEKFVPKISLAGGEKYVAHRCWEDVFDAITNAKHLIYITGWSVYTEISLVRDNRIAKPGGNIKLGELLKRKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETEHYFHDTAVHCVLCPRNPDDGGSIIQDLQISTMFTHHQKIVVVDSELPSGGSDQRRIVSFVGGIDLCDGRYDTPFHSLFRTLDSAHLNDFHQPNFPGAVITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVQLRELQDVIIPPSPVMFPDDHETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKDFIYIENQYFLGSSFAWSADDIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGIPESASVQAILDWQRRTMEMMYKDVIQALRANGIEDDPRNYLTFFCLGNRELKKDGEYTPAERPDPDSDYLRAQEARRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAYQPYHLAHRQPARGQIHGFRMSLWYEHLGMLDDSFFHPESEECVRKVNQMADKYWDLYSSESLERDLPGHLLRYPVGISEGGEISELPGFEFFPDTKARVLGAKADYMPPILTT | 808 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci13g1033 | 808 | PIRSF | PLD_plant | 1 | 808 | IPR011402 | GO:0004630|GO:0005509|GO:0016020|GO:0046470 | |
| Prci13g1033 | 808 | SMART | pld_4 | 326 | 364 | IPR001736 | GO:0003824 | |
| Prci13g1033 | 808 | SMART | pld_4 | 654 | 681 | IPR001736 | GO:0003824 | |
| Prci13g1033 | 808 | Gene3D | Endonuclease Chain A | 200 | 443 | - | - | |
| Prci13g1033 | 808 | Pfam | C2 domain | 8 | 127 | IPR000008 | - | |
| Prci13g1033 | 808 | SMART | C2_3c | 9 | 124 | IPR000008 | - | |
| Prci13g1033 | 808 | CDD | PLDc_pPLDalpha_2 | 492 | 701 | - | - | |
| Prci13g1033 | 808 | ProSiteProfiles | C2 domain profile. | 1 | 125 | IPR000008 | - | |
| Prci13g1033 | 808 | Gene3D | Endonuclease Chain A | 479 | 700 | - | - | |
| Prci13g1033 | 808 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 6 | 150 | IPR035892 | - |
Showing 1 to 10 of 22 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci13g1033 | K01115 | - | gmx:100786410 | 1482.23 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Prci13g1033 | 13 | 8649404 | 8653545 | Prci12g1840 | 12 | 36144023 | 36147511 | CCT | |
| Prci12g1840 | 12 | 36144023 | 36147511 | Prci13g1033 | 13 | 8649404 | 8653545 | ECH | |
| Prci15g1005 | 15 | 6257423 | 6260953 | Prci13g1033 | 13 | 8649404 | 8653545 | ECH | |
| Prci13g1033 | 13 | 8649404 | 8653545 | Prci13g1033 | 13 | 8649404 | 8653545 | ECH |
Showing 1 to 4 of 4 entries