Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0970 ATGAAGAAAGAAAACATTGGCTCTTCCAAAGCTGCAGAGCTCCCTGGTCGCTTGACTCGTGCACGAGCTGCTGCCTTTCATGCAAATGTACAGCTGCCACCTCTCAAGGAGCCAAGACAACAAAATCAGAAGCCATTACGAGCTAAATCAAAAAGAGCTACTTCTGATCAAACATGTCCTCAGCGTAAAAAGAGGGCTGTTCTTCAGGATGTTACCAATGTTTTCTGTGAAAATTCATATAAGAGCTGTTTCAATGCAACTAAAATTCAGGCTAAGAAAGGCAAGCTGACTAAAACAGGCCCAGTCAATATTTCCAGGGAAGTTCCTTCAGTTTCTGGGAAGCTACCACCGCTTCAAGTTGACTCACAACCAAAGACTTTACCAGAAACAGGACTTGTATCAGAAGATGCTACCTGTTCAAGTAATTTGGAAGACAATGCCCTCCATCAGACAAGTGGCCACAATGTGTGTAGCGCAAATGATGGTCTGCTTGGAGGGCAGACTCCTGGATTATGTCCTCAGCCACTGATTTCTCTAACGAAAGTCAAGAGAGTTATCCTTTCTGAACTTCCAAGTGCATCGAAGAATCAAGATGTCACTGATATAGATGCTGATCATGAAGATCCTCAATTATGCAGTGACTATGCTTTTGATATCTACAACAACTTACGTGTTTTTGAGCTTGCAAGAAGACCTTGTACTGACTTCATGGAAACAGTTCAGCGAGATATCACTCAAAGCATGCGTGGGATATTAGTTGACTGGCTTGTAGAGGTTTCTGAGGAGTACAAATTGGTTCCAGATACTTTATACCTGACTGTATATCTCATAGATTGGTTTCTCTCCAAAAATTACATCGAAAGGCAAAGACTTCAGCTGCTTGGCATCACCTGCATGCTAATTGCTTCGAAGCTTGAAGAAATTTGTCCCCCGCGGATTGATGAATTCTGCTTCATCACAGACAACACTTACACAAAAGAGGAGGTACTTAAAATGGAGACTCAAGTGTTTAGGTGTTCCCAATTTCAAATGTTTGCTCCCACAACAAAAACTTTCCTCAGGAGGTTTCTTCGAGCAGCGCAAGCTTCTTACAAGTGTCCTAGCCTTGAATTGGAATACCTGGCCAACTATCTTGCTGAACTAAGCCTCATGGACTTTAGTTTCTTGACTTTCCTTCCTTCTCTGATCGCTGCATCGGCTGTATTTCTGGCCAGATGGACATTAGATCAGTCATATCACCCTTGGAATCCAACTCTTGAACATTATTCAAGATATACAGCGTCAGATTTGAAATCCACAATTATTGCCTTGCAAGATCTGCAGATGAATACCGAAGGCTGCCCTTTAAGTGCCATTAGGATGAAGTACAGGCAAGACAAGTTTAAACAAGTGGCTGCCATGTCTTCGCCGAAACTGCTTGAAACTCTGTTCTGA 1434 0.4254 MKKENIGSSKAAELPGRLTRARAAAFHANVQLPPLKEPRQQNQKPLRAKSKRATSDQTCPQRKKRAVLQDVTNVFCENSYKSCFNATKIQAKKGKLTKTGPVNISREVPSVSGKLPPLQVDSQPKTLPETGLVSEDATCSSNLEDNALHQTSGHNVCSANDGLLGGQTPGLCPQPLISLTKVKRVILSELPSASKNQDVTDIDADHEDPQLCSDYAFDIYNNLRVFELARRPCTDFMETVQRDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVYLIDWFLSKNYIERQRLQLLGITCMLIASKLEEICPPRIDEFCFITDNTYTKEEVLKMETQVFRCSQFQMFAPTTKTFLRRFLRAAQASYKCPSLELEYLANYLAELSLMDFSFLTFLPSLIAASAVFLARWTLDQSYHPWNPTLEHYSRYTASDLKSTIIALQDLQMNTEGCPLSAIRMKYRQDKFKQVAAMSSPKLLETLF 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0970 477 Pfam Cyclin, N-terminal domain 218 342 IPR006671 -
Prci13g0970 477 PANTHER CYCLINS 182 455 IPR039361 -
Prci13g0970 477 CDD CYCLIN_AtCycA_like_rpt1 208 343 - -
Prci13g0970 477 Gene3D - 232 345 - -
Prci13g0970 477 MobiDBLite consensus disorder prediction 1 61 - -
Prci13g0970 477 Gene3D - 218 466 - -
Prci13g0970 477 MobiDBLite consensus disorder prediction 107 129 - -
Prci13g0970 477 FunFam Cyclin A1 334 466 - -
Prci13g0970 477 SMART Cyclin_C_2 347 470 IPR004367 -
Prci13g0970 477 SUPERFAMILY Cyclin-like 207 343 IPR036915 -
Prci13g0970 477 FunFam Mitotic cyclin 6 232 332 - -
Prci13g0970 477 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Prci13g0970 477 CDD CYCLIN_AtCycA-like_rpt2 347 461 - -
Prci13g0970 477 PIRSF Cyclin_A_B_D_E 19 476 IPR046965 GO:0016538|GO:0044772
Prci13g0970 477 SMART cyclin_7 351 439 IPR013763 -
Prci13g0970 477 SMART cyclin_7 254 338 IPR013763 -
Prci13g0970 477 Pfam Cyclin, C-terminal domain 347 469 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0970 Prci-Chr13 8067052 8074921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0970 1 477 Core Cell Cycle Gene Families AT1G80370 54.451 4.60e-166 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0970 K06627 - gmx:100789757 609.757