Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0968 ATGCCTCCAAAACCCCCCCACGTGTCGCCTACTCGTTGGCCTATCCCTCTCACTATTTCTTTATATAACATCTCTGCCTTCTTACCGTCACCGTCTCTGCTCAGTGCTCACACAACTATCATTTTCTCAGCTACCCAAAGGCAATTTCCACGTCCAACCAAAAGCATGTCGTCGGAGAATCAACCGGAAGATGAAGCCGTCGAGCTCAATTTCAAGGACACCGAACTCACCTTGGGCCTTCCCGGAGCTAAAACCGGTTCTAAACGCGGATTCTCCCACACCGTTGATCTTAATCTAGGCACTAAGGACGCCAACAACAATAACAGCCACGGCTCAGCCTGTGATAAATCTCCGGCACCAAAGGCACAGATGGTGGGGTGGCCACCGGTGAGGGCGAGCAGAAAGAGCGTGATGAAGAGTTGCAAGTACGTGAAGGTGGCGGTGGACGGAGCTCCATATCTGAGGAAAGTAGATCTTGAAATGTATCACAGTTACGAGCAGCTTCTAAGGTCTTTAGAAACCATGTTTTCCTGCTTAACCATCCGTAACGATTTGATCTTGAAGGAGAGGAACAGTGGAAACATTAACGGAGGCGAATACGTACCTACCTTTGAGGACAAAGATGGTGACTGGATGATGGTCGGGGATGTACCCTGGAAGATGTTTGTTGAATCCTGCAGAAGGATAAGGTTGATGATAAGCTCAGAGGCCACTACTGGCTCAGAGTGA 729 0.4925 MPPKPPHVSPTRWPIPLTISLYNISAFLPSPSLLSAHTTIIFSATQRQFPRPTKSMSSENQPEDEAVELNFKDTELTLGLPGAKTGSKRGFSHTVDLNLGTKDANNNNSHGSACDKSPAPKAQMVGWPPVRASRKSVMKSCKYVKVAVDGAPYLRKVDLEMYHSYEQLLRSLETMFSCLTIRNDLILKERNSGNINGGEYVPTFEDKDGDWMMVGDVPWKMFVESCRRIRLMISSEATTGSE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0968 242 SUPERFAMILY CAD & PB1 domains 133 233 - -
Prci13g0968 242 Gene3D - 136 241 - -
Prci13g0968 242 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 68 238 IPR003311 GO:0005634|GO:0006355
Prci13g0968 242 Pfam AUX/IAA family 65 238 IPR033389 -
Prci13g0968 242 MobiDBLite consensus disorder prediction 102 128 - -
Prci13g0968 242 ProSiteProfiles PB1 domain profile. 141 238 IPR000270 GO:0005515
Prci13g0968 242 FunFam Auxin-responsive protein 136 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0968 Prci-Chr13 8058352 8059754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0968 115 237 B3 DNA Binding Superfamily AT3G61830 29.268 1.07e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci13g0968 AUX_IAA 7.8e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0968 K14484 - tcc:18595855 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0968 13 8058352 8059754 Prci13g0968 13 8058352 8059754 ECH