Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0967 ATGATGGAAAAAGATGGTGGACTTGGACTTGAGATCACAGAGCTGAGGCTGGGTCTTCCTGGGAGGGAGGGGATGAAGAAGAAGAATGAGAAGAAGAGGCTGTTCTCGGAGATTGATGATCATGGCGGCGGCGGAGATGATCAGAACAGCTTGTCGGCGGGGAAGAAGAATAACGAGGAGGTGGTGGTGGGGTGGCCGCCGGTGTGCTCGTACCGGAGGAAGAATAGCATGGTGAACGAAGGGTCAAAAATGTACGTGAAAGTGAGCATGGATGGAGCTCCTTTCTTGCGCAAAATAGACTTGGAAAAACACAAGTGTTACTCTCAACTCGCTTTTGCCTTGGAAAAGCTCTTTGGTTGCTATGGACTCGAGGAGACGTTGAAGAATGGAGACAAAAGCGAACACGTTCCCATTTATGAGGACAAAGAGGGTGACTGGATGCTGGTTGGAGATGTCCCTTGGGAGATGTTTATGGAGTCCTGCAAGAGGTTGAGGATTATGAAGAAATCAGACGCAAAGGGATTTGGATTGACACCAAAAGGGTCTCTAAAGGGATATATAGAAGAAGGCGCCACCAACTGA 582 0.488 MMEKDGGLGLEITELRLGLPGREGMKKKNEKKRLFSEIDDHGGGGDDQNSLSAGKKNNEEVVVGWPPVCSYRRKNSMVNEGSKMYVKVSMDGAPFLRKIDLEKHKCYSQLAFALEKLFGCYGLEETLKNGDKSEHVPIYEDKEGDWMLVGDVPWEMFMESCKRLRIMKKSDAKGFGLTPKGSLKGYIEEGATN 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0967 193 FunFam Auxin-responsive protein 78 179 - -
Prci13g0967 193 Pfam AUX/IAA family 53 175 IPR033389 -
Prci13g0967 193 Gene3D - 78 180 - -
Prci13g0967 193 MobiDBLite consensus disorder prediction 21 44 - -
Prci13g0967 193 MobiDBLite consensus disorder prediction 21 55 - -
Prci13g0967 193 SUPERFAMILY CAD & PB1 domains 75 168 - -
Prci13g0967 193 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 9 173 IPR003311 GO:0005634|GO:0006355
Prci13g0967 193 ProSiteProfiles PB1 domain profile. 83 171 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0967 Prci-Chr13 8043887 8048243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0967 38 189 B3 DNA Binding Superfamily AT4G23980 32.237 6.18e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci13g0967 AUX_IAA 1.4e-43 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0967 K14484 - gmx:547784 279.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1904 12 36658347 36661178 Prci13g0967 13 8043887 8048243 CCT
Prci13g0967 13 8043887 8048243 Prci13g0967 13 8043887 8048243 ECH