Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0966 ATGGATGTTACCTCCCCAGAACCTAATAGAACCCAAACCGACCATTATCCTTTGCTGATGGAGCAGTCTGAAAGCCACCATCAGCACGTAATTGACATCACAAGGAATGGTGATGCTTTAGCCAGCTCATCTCATGTTGCTCAACTTCCTGAAATACATTTGATGCACAATGAAGATCAACGGTCTAGTGGTACACGAGACCCTGCTCATCAAACATCTTCCTCATCTAGATTAAACTCTAGAAATTCCTCATCAACAAGAGGTGAGGGGTATCATCATCGAAGAAGGAATCCATTAAATTCTGGACTATGGATTTGTGAGCTTGTTGTCACTGTGGGTCAGATCATAGCATCAATAGTTGTCTTGTCATTGTCGAGGAATGAAAATCCGCAAGCCCCATTATTTGCATGGATTGTGGGCTATACATCTGGTTGTGTGGCCACACTTCCTATCCTATATTGGCGTTATCGAAGCCGTAATCAGAGTACTGAACAAGATACATCTCAACAATCTCAAGGATCTTCTGGAAGTGATCGTCCATTGCCTACCTCATATACTGCAGTCTCTGATGCTCATGTTTCAGATGAGGAGAATAGTCGTGTCACAGAATCAGCTGCGAGAAACAGTAGGATTCCTGGACCTTTATCCGATCAGAGATTTTATTGTAATTTTCTGCTAAATTGCAGGCTTAATGGATTAGTAGATCAGTTCAAAATGGCCTTAGATTGCTTCTTTGCAGTTTGGTTTGTTGTGGGTAATGTGTGGATCTTTGGAGGCCATTCTTCTCCTTCCGATGCTCCAAAATTGTATAGGTTATGTATTGTGTTTCTTACCTTTAGCTGCATTGGATATGCTATGCCATTTATCCTATGTGCGACAATTTGGTGCTGCCTACCTTGCATAATTTCTGTTCTGGGCATCCGTGAGGATTTTTCCCAAACTAGAGGCGCGACAGTGGAGTCTATTAACGCCCTTCCAATTTACAAGTTCAAATTGAAGAAAACTGAAAATAGTGATAATCAGGATGTCAACACAGCTGTGGATGGTGGTATATTTGCTGCAGGGACAGAAAGGAGCAAGCCTTCTGGAGAAGATGCTGTAATTTGCTGCATTTGCTTGGCGAAATATGCTGACAATGATGATCTTAGGGAGCTACCCTGTCTTCATTTCTTTCACGTAGACTGTGTTGATAAATGGTTGAAGATAAACGCATCGTGTCCTCTTTGTAAAAGTGATGCTGGTAAGATTAGTGGGGAGCCTCCTTCAGCCGGGGAATCCAGTTAG 1284 0.4245 MDVTSPEPNRNXQTDHYPLLMEQSESHHQHVIDITRNGDALASSSHVAQLPEIHLMHNEDQRSSGTRDPAHQTSSSSRLNSRNSSSTRGEGYHHRRRNPLNSGLWISXELVVTVGQIIASIVVLSLSRNENPQAPLFAWIVGYTSGCVATLPILYWRYRSRNQSTEQDTSQQSQGSSGSDRPLPTSYTAVSDAHVSDEENSRVTESAARNSRIPGPLSDQRFYCNFLLNCRLNGLVDQFKMALDCFFAVWFVVGNVWIFGGHSSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATIWCCLPCIISVLGIREDFSQTRGATVESINALPIYKFKLKKTENSDNQDVNTAVDGGIFAAGTERSKPXSGEDAVICCICLAKYADNDDLRELPCLHFFHVDCVDKWLKINASCPLCKSDAGKISGEPPSAGESS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0966 430 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 21 415 - -
Prci13g0966 430 SMART ringv_2 371 413 IPR011016 GO:0008270
Prci13g0966 430 MobiDBLite consensus disorder prediction 165 187 - -
Prci13g0966 430 MobiDBLite consensus disorder prediction 1 20 - -
Prci13g0966 430 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 355 420 IPR013083 -
Prci13g0966 430 ProSiteProfiles Zinc finger RING-type profile. 372 413 IPR001841 -
Prci13g0966 430 MobiDBLite consensus disorder prediction 67 87 - -
Prci13g0966 430 Pfam Ring finger domain 372 413 IPR001841 -
Prci13g0966 430 MobiDBLite consensus disorder prediction 1 98 - -
Prci13g0966 430 SUPERFAMILY RING/U-box 371 419 - -
Prci13g0966 430 SMART ring_2 372 412 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0966 Prci-Chr13 8015272 8020061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0966 1 420 C3H Transcription Factor Family AT1G80400 54.846 6.10e-158 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0966 - - gmx:100819729 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0966 13 8015272 8020061 Prci13g0966 13 8015272 8020061 ECH