Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0958 ATGTGGAAAGAAATCATCACACAAGTCTTGTACGAATTTGCGGCACCTTTTGAAAGTTTCTTCGACGACGTCGTTTTCGCCGATCATTCCAGTCCTAACCACATGGTCGACGGTGGCGATGAGTTCAGTTTTGATGCCGATCAGTCCAGTCCTTACCACGCGATTGACGATGGCGATGGGTTCAACTTCGATGAGCTCATGGAAGAGCCGTTGATGAGGCCAAATTCTATGCGATCATTGAAGGAACTGAAATTGGATGAGAAAACAAAAGAAGAACAGTGCAGTGTTTGTCTGGAATCTTTTGAAGACAATGATGATGTTTTAGTGACGCCATGTAATCATATTTATCATAGAAAATGTATTGTTCATTGGTTTCTTGTAAGTTCTATGTGTCCACTGTGCCGTCGCTTCACAGTGCCTTCCTTGGATTCTCAGGTACCCTAA 444 0.4324 MWKEIITQVLYEFAAPFESFFDDVVFADHSSPNHMVDGGDEFSFDADQSSPYHAIDDGDGFNFDELMEEPLMRPNSMRSLKELKLDEKTKEEQCSVCLESFEDNDDVLVTPCNHIYHRKCIVHWFLVSSMCPLCRRFTVPSLDSQVP 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0958 147 SMART ring_2 94 134 IPR001841 -
Prci13g0958 147 SMART ringv_2 93 135 IPR011016 GO:0008270
Prci13g0958 147 Pfam Ring finger domain 93 135 IPR001841 -
Prci13g0958 147 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 61 139 IPR013083 -
Prci13g0958 147 CDD RING-H2_PA-TM-RING 93 135 - -
Prci13g0958 147 SUPERFAMILY RING/U-box 88 141 - -
Prci13g0958 147 PANTHER SI:CH211-59O9.10 68 136 - -
Prci13g0958 147 ProSiteProfiles Zinc finger RING-type profile. 94 135 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0958 Prci-Chr13 7963656 7964099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0958 74 135 C3H Transcription Factor Family AT3G58720 41.935 2.99e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0958 - - pcin:129289852 306.219