Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0929 ATGGATGATACCAAGGATGATGTAAGATATCCCTCTAATATGTATGGTGATAAAAACCATCAAGGTTATGGCTATCTGAATCATAAAAAACATTCGGTTAGGAGTTCTCCTTATTCCCAGCCAGTAACGGGTGAGTATGTGGAAGATAATGATGATGATGAGGATGGAGAAGATGTGGAACTTTTAGGAGACGAGGAAGATGAGGATGTTGATCAGAGTAATAATATTTATTCACAAAATGATGTTGCTGACAATGATTATGAGGAAGATGCTCAGGTTGAAGATGATGATGAAAATCATGGTAACAATAACAACAATGATGATGGCAATGATGGTGATGGTGATGATGACAACGAAAATCATGGTGGTAAGAAGAAGAGTTACAAGAAGAGAGTTGAAGATGATTCAGAATGGCATCCAAAAAAGAGAAAGCTGAAAAGCTTGATTTCAGCTTATGAAGTTGCCCCTCGTGTGCCAGCAGCACCATCAGCTGCAGCTCACTCAGCTCAGAAACCATATTTTGGTTCCAGGAATTCACTTACCGACTGGACTGAACACGAGACGTTTGTTCTTCTTGATGCTTGGGGGAACCGGTTTCTTCAACAGGGAAGGAAGAGTCTTCGGTCTGAGCAATGGCAAGAAGTTGCAGAAGAAGTATCAGAAGTTTCAAAAATTGAAAGGACAGATACCCAGTGTCGGAATCGTCTAGACACATTAAAGAAAATGTACAAAAAGGAGAAAGCTAAATTAGCAGAAATGGTTGGTGGATCTAGCAAATGGGTCTATTTCAAAAGGATGGATAAGCTGTTGTCTTCTCCTCCACAGAATGCTGGTCTCTCTTGCGGTTTAGACTCAGGAGAGTATGTTTTTATGAACCCTAGAGTTTATTTGAACCGTGCAAACGGGTTAGATGAAATGAGGGATAGTCCAGGGAATTCAGAATCTACTGGTGAAGATGAAGGTTTAGATGGACTTCATGCAAAGAAAAGAAGGCATGGAAGGGACAGTGATGAAACTTCCTTCAGATTGCTTGCTGAATCGATTCAGAAATTCGGTGAGACATATGAGAAGATTGAAAATAGTAAAAGGCAGCAGATGGTGGAACTGGAAAAGATGAGAATGGATTTCCAAAGAGAATTGGAAACACAGAAGAGGCAGATATTAGAGAGATTGCAATCTGAGATTGCAAAACTGCAGCAGAGAGATAATGAGGAGAATGATGATTCTGTGGAGAAGGATGAGTAA 1245 0.4016 MDDTKDDVRYPSNMYGDKNHQGYGYLNHKKHSVRSSPYSQPVTGEYVEDNDDDEDGEDVELLGDEEDEDVDQSNNIYSQNDVADNDYEEDAQVEDDDENHGNNNNNDDGNDGDGDDDNENHGGKKKSYKKRVEDDSEWHPKKRKLKSLISAYEVAPRVPAAPSAAAHSAQKPYFGSRNSLTDWTEHETFVLLDAWGNRFLQQGRKSLRSEQWQEVAEEVSEVSKIERTDTQCRNRLDTLKKMYKKEKAKLAEMVGGSSKWVYFKRMDKLLSSPPQNAGLSCGLDSGEYVFMNPRVYLNRANGLDEMRDSPGNSESTGEDEGLDGLHAKKRRHGRDSDETSFRLLAESIQKFGETYEKIENSKRQQMVELEKMRMDFQRELETQKRQILERLQSEIAKLQQRDNEENDDSVEKDE 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0929 414 ProSiteProfiles Myb-like domain profile. 183 240 IPR001005 -
Prci13g0929 414 MobiDBLite consensus disorder prediction 303 338 - -
Prci13g0929 414 MobiDBLite consensus disorder prediction 116 141 - -
Prci13g0929 414 FunFam trihelix transcription factor ASIL2 183 245 - -
Prci13g0929 414 Coils Coil 355 408 - -
Prci13g0929 414 Gene3D - 183 245 - -
Prci13g0929 414 MobiDBLite consensus disorder prediction 311 338 - -
Prci13g0929 414 MobiDBLite consensus disorder prediction 1 141 - -
Prci13g0929 414 MobiDBLite consensus disorder prediction 46 72 - -
Prci13g0929 414 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 172 405 IPR044823 -
Prci13g0929 414 Pfam Myb/SANT-like DNA-binding domain 182 269 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0929 Prci-Chr13 7742680 7744824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0929 341 401 Trihelix Transcription Factor Family AT3G14180 49.180 1.04e-11 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci13g0929 Myb_DNA-bind_4 8.1e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0929 - - qsa:O6P43_018122 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0929 13 7742680 7744824 Prci13g0929 13 7742680 7744824 ECH