Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0926 ATGAGCGTGGTTGGTTTTGATTTTGGGAATGAGAGCTGCATTGTTGCTGTTGCAAGGCAGAGGGGGATTGATGTTGTACTCAATGACGAGTCCAAGCGGGAAACTCCTGCAATTGTATGCTTTGGTGACAAACAAAGGTTCATTGGAACTGCTGGGGCGGCATCTACTATGATGAACCCCAAGAATTCAATCTCACAGATAAAGAGATTAATTGGTAGACAATTTTCCGACCCTGAATTGCAGCAGGATCTGAAGTCATTACCTTATGTTGTCACTGAAGGGCCTGATGGATTTCCATTAATTCATGCCCGGTATTTGGGTGAAGTTAGGACGTTCACGCCTACTCAAGTCCTGGGAATGGTGTTGTCAGATCTCAAGGGGATTGCTGAGAAGAATCTGAATGCAGCTGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGACCTTCAGAGAAGAGCAGTGTTAAATGCGGCCAAGATTGCTGGCCTGCATCCTCTTCGCTTGATTCATGAAACAACAGCAACTGCCTTGGCTTATGGAATTTATAAAACAGATCTTCCTGAAAATGATCAACTGAACGTTGCCTTTGTTGATATTGGGCATGGTAGCATGCAAGTTTGTATTGCTGGCTTTAAAAAGGGGCAGCTGAAAGTGTTGGCCCATTCATTTGATAGGTCTCTAGGTGGTAGGGATTTTGACGAGGTCTTATTCAATCAATTTGCAGCAAAATTTAAGGAGGAGTACAAGATTGACGTTTTCCAGAATGGCAGGGCTTGCTTAAGGCTCAGGGCTGCATGTGAGAAGCTGAAGAAGGTTCTCAGTGCAAATCCAGAGGCACCTCTGAACATTGAATGCCTTATGGATGAGAAGGATGTCAGGGGATTCATCAAGCGTGAGGATTTTGAGCAACTAAGTATTCCAATCTTGGAGCGTGTGAAGATACCTTTGGAGAAGGCACTAACAGAAGCAAACCTTACAGTTGAGAATGTCCATGTGGTTGAGATGGTTGGCTCAGGCTCTCGCGTACCAGCTATAAACAAAATATTGACAGAATTTTTCAAAAAGGAGCCTAGGCGCACAATGAATGCAAGTGAGTGTGTTGCCAAGGGTTGTGCCTTGCAATGTGCAATTCTCAGTCCGACTTTTAAAGTACGAGAGTTTCAGGTCAATGAAAGCTTTCCCTTTTCAATTTCACTTTCATGGAAAGGCTCTGGTCCTGATGCTCAAGAAGGTGGACCAGATAATCATCAAAGTACGGTTGTTTTTCCCAAAGGAAATGCCATTCCTAGTGTCAAGGCCCTGACATTCTACAGGTCAGGAACATTTTCTGTTGATGTGCACTATAATGATATGAGTGAGCTGCAAGGACCTGCCAAGATTAGCACATACACTATCGGTCCTTTCCAAACTACAGATAGTGAAAGGGCAAAAGTTAAAGTAAAAGCTCGTCTTGATTTGCATGGAATTGTATTTGTTGAGTCAGCTACGCTTCTGGAGGAGGAAATTGTTGAGGTTCCAGTGTCAAAAGAACCAGCTGGAGAAAATGCTAAGATGGACACTGATGAGGCTCCTATTGATGCTGCTGCACCACCACCAAGCTCTAATGATACTGATGTCAATATGCAAGATGCAAAGGCAACTGCTGATTACCCTGGGACTGAAAATGGCCTCCCTGATACAGCAGACAAGCCTGTGCAGATGGATACTGATACCAAGGCTGAGGCTCCGAAGAAGAAGGTCAAGAAGACAAACATACCCGTTTCAGAGCTAGTTTATGGAGCCCTCTCCCCTGAAGATCTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTACAAGATCGAGTGATGGAGGAAACAAAAGACAGGAAAAATGCAGTTGAGGCATATGTTTATGACATGAGAAACAAGCTTGCTGACAAGTACCAAGATTTTGTCACTGCTTCAGAGAGGGAGGAGTTTAGTGCCAAACTTCAGGAGGTAGAAGACTGGTTATATGAAGATGGCGAAGATGAAACTAAAGGTGTATACACTGCCAAGCTTGAGGAACTCAAGAAGCAAGGTGATCCAATTGAAGAGCGATACAAGGAATATATGGAGAGGGGTACGATAATCGATCAGTTCATCTATTGCATAAATAGTTACAGAGAAGCTGCCATGTCAAATGATCCCAAATTTGATCATATTGACATCTCGGAGAAGCAGAAGGTATTGAGTCAATGTGTGGAAGCTGAAGCCTGGCTTAGGGAGAAGAAGCAGCAGCAGGATTCGCTTCCAAAATATGCTCCTCCTGTACTCCTGTTAGCTGACATAAGAAAGAAAGCTGAGGCAGTTGATAGGTTCTGTAAGCCAATCATGACAAAACCAAGGCCAGTCAAGCCTGCTGCTCCTGAACCAGCTGTGACCCCACCTCCTCAGGATGGTGAGCAGCCGCCTCAACAAACTGAGGGGGATGCCAACACCAATACTAATGCTGGCGTCACTGAAAATGCCGAGGAAAGTGCTGCTCAGGCACCGCCAACAGCGGCTGAACCGATGGAGACTGACAAGTCAGAGAACACAAGCTCTGCATGA 2580 0.4465 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGRQFSDPELQQDLKSLPYVVTEGPDGFPLIHARYLGEVRTFTPTQVLGMVLSDLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLNAAKIAGLHPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHGSMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFNQFAAKFKEEYKIDVFQNGRACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKREDFEQLSIPILERVKIPLEKALTEANLTVENVHVVEMVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSGPDAQEGGPDNHQSTVVFPKGNAIPSVKALTFYRSGTFSVDVHYNDMSELQGPAKISTYTIGPFQTTDSERAKVKVKARLDLHGIVFVESATLLEEEIVEVPVSKEPAGENAKMDTDEAPIDAAAPPPSSNDTDVNMQDAKATADYPGTENGLPDTADKPVQMDTDTKAEAPKKKVKKTNIPVSELVYGALSPEDLQKAVEKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLADKYQDFVTASEREEFSAKLQEVEDWLYEDGEDETKGVYTAKLEELKKQGDPIEERYKEYMERGTIIDQFIYCINSYREAAMSNDPKFDHIDISEKQKVLSQCVEAEAWLREKKQQQDSLPKYAPPVLLLADIRKKAEAVDRFCKPIMTKPRPVKPAAPEPAVTPPPQDGEQPPQQTEGDANTNTNAGVTENAEESAAQAPPTAAEPMETDKSENTSSA 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0926 859 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Prci13g0926 859 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 4 230 313 - -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 4 38 113 - -
Prci13g0926 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 719 794 IPR029048 -
Prci13g0926 859 MobiDBLite consensus disorder prediction 511 582 - -
Prci13g0926 859 Gene3D Actin; Chain A, domain 4 230 313 - -
Prci13g0926 859 CDD HSPA4_like_NDB 2 381 - -
Prci13g0926 859 Gene3D - 186 360 - -
Prci13g0926 859 Coils Coil 683 703 - -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 14 387 595 - -
Prci13g0926 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 597 697 IPR029048 -
Prci13g0926 859 Gene3D - 5 374 - -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 4 1 78 - -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 4 597 707 - -
Prci13g0926 859 FunFam Heat shock 70 kDa protein 4 111 209 - -
Prci13g0926 859 Gene3D - 597 706 IPR029048 -
Prci13g0926 859 Gene3D - 38 113 - -
Prci13g0926 859 MobiDBLite consensus disorder prediction 784 859 - -
Prci13g0926 859 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Prci13g0926 859 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Prci13g0926 859 MobiDBLite consensus disorder prediction 792 812 - -
Prci13g0926 859 PANTHER HSC70CB, ISOFORM G-RELATED 1 850 - -
Prci13g0926 859 MobiDBLite consensus disorder prediction 813 837 - -
Prci13g0926 859 PRINTS 70kDa heat shock protein signature 363 383 - -
Prci13g0926 859 PRINTS 70kDa heat shock protein signature 2 15 - -
Prci13g0926 859 PRINTS 70kDa heat shock protein signature 30 42 - -
Prci13g0926 859 PRINTS 70kDa heat shock protein signature 140 160 - -
Prci13g0926 859 PRINTS 70kDa heat shock protein signature 332 348 - -
Prci13g0926 859 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Prci13g0926 859 MobiDBLite consensus disorder prediction 567 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0926 Prci-Chr13 7729623 7735122 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0926 4 438 Calmodulin-binding Proteins AT1G16030 35.388 1.35e-84 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0926 K09489 - qsa:O6P43_027794 1421.37