Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0919 ATGCCTAAGAAGCTTCAAAAGTCTCTCCATGACTACATCTCCAAGCTCAGACGAAACCCTAATCCCCAAATAAATTTCTCTTCCTCCAAAAATTGGATCTTCTCTGCCTGCAAGCACCCTAAAACCTTGTCTGTAGACGTTGATCATCTCCGAAGAAATGAAGCTCAAGCCAAACGCAGTAGCAACAACGACGATGCTGCGTCTCTTTCTGATGTTGATCGTTTCCTGTTCGAGAATTTCAAGTCTCTATATGTCAGAGAAGACAATGACCAAACGGAAAGAAAGGCAGAATCTGAACAAGATATCATTGAAGCTTATCCTAAATTAGACCCAATCTTGTTTGAATCGCCGCGGCTCGACCTTGGCCTCCCGCCGGATCTTCGTGGATCGAACCGGTTCTTCGTGACGCCGGGCTTGTCTGGCTCAATCGTCGAGGATGCTGCGAGGTTGAGCGTGACAACCACATGCGACGACGAAGCCTGTTCGAGCTCGAGCTCGACCACAACGCTCAATGATTCTCCGAATTTATCTTATAATCATCGTGAAAGTGCGACCGTGGAGACGCTTCCAAGAGATTTCATCGCCGTCTTGCTGTACTCGCCGAGTCCGTACGAAGATTTCCTGCGGTCCATGCAGGATATGGTGGAAGCGAGGTTGAATAATCACGAAGGAGTGGATTGGGATTTCATGGAAGAGCTTTTGTTTTGTTATCTCAACCTGAACGAGAAGAAATCGCATAAGTTCATACTCAGTGCTTTCGTGGATGTCATCGCCGGTTTGCGTCGGAGATCGGAGAAAGTGCCAGTGACACTGCGGCGAAGTGTTCGGACCGTAAGGATCGGTAGGTCGTTACGGAGAAGATGA 864 0.4815 MPKKLQKSLHDYISKLRRNPNPQINFSSSKNWIFSACKHPKTLSVDVDHLRRNEAQAKRSSNNDDAASLSDVDRFLFENFKSLYVREDNDQTERKAESEQDIIEAYPKLDPILFESPRLDLGLPPDLRGSNRFFVTPGLSGSIVEDAARLSVTTTCDDEACSSSSSTTTLNDSPNLSYNHRESATVETLPRDFIAVLLYSPSPYEDFLRSMQDMVEARLNNHEGVDWDFMEELLFCYLNLNEKKSHKFILSAFVDVIAGLRRRSEKVPVTLRRSVRTVRIGRSLRRR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0919 287 ProSiteProfiles OVATE domain profile. 196 259 IPR006458 -
Prci13g0919 287 Pfam Transcriptional repressor, ovate 200 260 IPR006458 -
Prci13g0919 287 NCBIfam uncharacterized plant-specific domain TIGR01568 194 261 IPR006458 -
Prci13g0919 287 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 70 260 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0919 Prci-Chr13 7676888 7683717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci13g0919 Ovate 1.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0919 - - qsa:O6P43_018128 276.559