Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0909 ATGGCCACCAAAATTTTTCTATCTCCTCTTTTTATACTCCTTGCTTTCCTAGTCCTCGTTCAAATTACTGGCTCGTCTGAAGCTGGCGATGATATAATCGGCGTTTACTGGCGTCTGACGAGTGATAACAGTAATCTTACAGAAGCATGCGCCACTGGAAAATACACTTACGTGGTCATATTCTATCTCTTGATGACCTCTCCGGGTGAATTTAGCCCTCAACTCCTGGACACCCCAGCAGGTATCTGCAGTGGCCCTCCTTTATCATGCCCCACCATTGGCACAAGTATCAAATACTGCCAACAACAAGGGATCAAGGTGATGCTCTATGTTGCCGGAGAAGGTTGGAATGTCACTCTATCTTCTGCTGACAAGGCTCGAAGTGTTTCTGATTACTTGTGGAACACTTTCTTGGGAGGAAATTCATCTTCTCGCCCATTTGGAGATGCCATATTAGACGGCGTCAATTTTGATATCCGCTATTCTACACCATACTGGAAGGACCTTGCTCTTTACTTGAAGTCACACAGCTCTGCAACACGAAGAGTCCTCTTATCTGCATCACCTCAATGCCGGTTTCCTGATAATTTTCGTGGCACTGCCCTTGAAGAACATCGCCTTTTTGACTATGTTTACATACAATTCCAGGGCGACCCTGCCTGCAAATATTCAGTATCACACGGTAGCGACTCATTATTAAATACATGGAACCAATGGACGAAATCATTATCAGATGGTGGCTCTAAAGTGTTGCTGTACTTGCCAGCATCTGAAAATGCTACGGACAGTGGCTTTATTCCTAGTGATGAGTTGATCAGTGATGTACTTCCTTTTGTAAGGAAGTCACCTAACTATGGTGGTGTGATGTTGTGGATGAGGGACTATGATGCACAGAATAATTACAGTGACGACATTAAACTCAGTTCTCTGTGCACAGAACTCAAAAACGCTTCCGCATGCGGGAACCACGACAACATCTTTGAAGAACAGGTCGGCAACATGTCCGCTGGTAGTTCAAAGATTTATGAAAGTCTACCGTGTTGTCAGACCATATGCAAGAACAATTGTTCCTGCGTCGCTTATGCACCAGTGAATTCCGGTCGTGGATGCCAGATATGGCTTCAAGGAGCCACATTCACGGCTGGAGCGAAAGGCCAGTCAATTTATGTTTTAGCTGTTAGACACAAAGGAAATAGGTGGTGGATATGGCTAATCACCGGGGTGGGATCAAGCATAGCATTATTTCTGATTTGTTACTTATCCTTACGGAGAAAACACAAAGCAGAAGTGGTCGGAACTACAAAGCAAAGGAAGATATTACATGACATTGGAGGCAGTGCAATGATTTACATGGCGCAAGGAAAAGCCAAAAGGAATCAGAAACATCAAATAGCAAGCAATAATAATGAGGTCGAAATATTCAGTTTTGAGAGCATTGCGGTTGCCACAAACAACTTCTCATTTTCAAACAAGCTAGGAGAGGGTGGTTTTGGTCCCGTTTATAAGGGAACACTAACTGATGGGCAAGAAGTAGCAATAAAGAGACTTGCTAAGAGTTCTGGACAAGGACTCACTGAATTTAAAAATGAAGCTAAACTCATGGCCCAACTGCAGCATACGAACCTTGTGAGGCTTATAGGGTTCTGCATCCAAAGAGATGAAAGAATATTGGTCTATGAATACATGTCCAACAAGAGCTTAGACTACTACCTATTTGATGAAATCAAACGGCATGTACTAGGTTGGGGAAAACGATTTAACATTATAGAAGGAATTGCCCAGGGGCTTCTTTATTTGCACAAGTATTCAAGACTAAAAGTTGTGCACCGTGACTTAAAGGCAGGAAATATTTTACTTGATGAAGAAATGAATCCTAAAATATCTGATTTTGGTATGGCTCGAATATTTGGGCCAAAAGGATATGAAGAAAGCACAAACAGAGTAGTTGGCACATATGGTTACATGGCTCCAGAATATGCAATGAACGGTGTTGTTTCGATCAAAATAGATGTATTTAGTTTTGGTGTTCTGCTACTTGAGATTCTTAGTGGCAAGAAGAACAATAGCCGTAATGATTTAGATGGTTGTCTCAATCTCATAGGATATGCATGGCGCCTTTGGAATGAAGATAGACCTTTAGAGTTAATGGACTCAGAATTAAGTGAACCAAATGACCAAAAGAAAGTGCTAAGAGGTATTCATATTGGTCTCTTATGCGTCCAAGATCAAGCAGTGGACAGACCTTTCATGGTTGATGTAATTTCTTTTTTATCAAATGATACAATTCAACTTGGCCAACCAAAGAAACCAGCATTTTTTAGTAGTGTGGTTGAGGAACAGTTCGTGTTATCCAACAGCAATCAAGAACTTTATTCCATAAACTGCGTAACAATGTCTAATATAGATGGCAGATAG 2415 0.4153 MATKIFLSPLFILLAFLVLVQITGSSEAGDDIIGVYWRLTSDNSNLTEACATGKYTYVVIFYLLMTSPGEFSPQLLDTPAGICSGPPLSCPTIGTSIKYCQQQGIKVMLYVAGEGWNVTLSSADKARSVSDYLWNTFLGGNSSSRPFGDAILDGVNFDIRYSTPYWKDLALYLKSHSSATRRVLLSASPQCRFPDNFRGTALEEHRLFDYVYIQFQGDPACKYSVSHGSDSLLNTWNQWTKSLSDGGSKVLLYLPASENATDSGFIPSDELISDVLPFVRKSPNYGGVMLWMRDYDAQNNYSDDIKLSSLCTELKNASACGNHDNIFEEQVGNMSAGSSKIYESLPCCQTICKNNCSCVAYAPVNSGRGCQIWLQGATFTAGAKGQSIYVLAVRHKGNRWWIWLITGVGSSIALFLICYLSLRRKHKAEVVGTTKQRKILHDIGGSAMIYMAQGKAKRNQKHQIASNNNEVEIFSFESIAVATNNFSFSNKLGEGGFGPVYKGTLTDGQEVAIKRLAKSSGQGLTEFKNEAKLMAQLQHTNLVRLIGFCIQRDERILVYEYMSNKSLDYYLFDEIKRHVLGWGKRFNIIEGIAQGLLYLHKYSRLKVVHRDLKAGNILLDEEMNPKISDFGMARIFGPKGYEESTNRVVGTYGYMAPEYAMNGVVSIKIDVFSFGVLLLEILSGKKNNSRNDLDGCLNLIGYAWRLWNEDRPLELMDSELSEPNDQKKVLRGIHIGLLCVQDQAVDRPFMVDVISFLSNDTIQLGQPKKPAFFSSVVEEQFVLSNSNQELYSINCVTMSNIDGR 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0909 804 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 31 312 IPR001223 GO:0005975
Prci13g0909 804 Gene3D Phosphorylase Kinase; domain 1 447 561 - -
Prci13g0909 804 SUPERFAMILY Protein kinase-like (PK-like) 470 793 IPR011009 -
Prci13g0909 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 562 765 - -
Prci13g0909 804 Gene3D Transferase(Phosphotransferase) domain 1 562 768 - -
Prci13g0909 804 Pfam PAN-like domain 346 375 IPR003609 -
Prci13g0909 804 Pfam Protein tyrosine and serine/threonine kinase 487 702 IPR001245 GO:0004672|GO:0006468
Prci13g0909 804 CDD STKc_IRAK 492 757 - -
Prci13g0909 804 Gene3D Glycosidases 32 309 - -
Prci13g0909 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 450 561 - -
Prci13g0909 804 Pfam Glycosyl hydrolases family 18 33 294 IPR001223 GO:0005975
Prci13g0909 804 SUPERFAMILY (Trans)glycosidases 30 305 IPR017853 -
Prci13g0909 804 ProSiteProfiles Protein kinase domain profile. 486 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0909 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Prci13g0909 804 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 311 779 - -
Prci13g0909 804 SMART serkin_6 486 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0909 Prci-Chr13 7604928 7608210 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0909 457 792 Receptor kinase-like Gene Family AT4G23190 51.445 1.84e-117 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g0909 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0909 - - lang:109358482 885.174