Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0905 ATGACCAAAATTTTTCTACTCCTCCTTTTCTCACAACTCAATCAACCTGGCTCTTCCGAATCCGAAGCCATTACCGTTTACTGGGGTCTGAATGGTGATGAGGGTAATCTTACAGAAACGTGTGCTACAGGAAAATACTCTTTTGTAGTGATTGGCTTCCTTTGGAGGTTTGGGAATGGCGAAACCCCTCGGCTCAACCTCGCCGATCACTGTGACCCTTCTTTATCTGGGTGCACCACCATGGGCAGTGAGATCAAATATTGTCAAGAACAAGGAGTCAAGGTGATGCTCTCTCTTGGAGGAGGATCTGCGAAATACTCTTTATCTTCCTCTGAGGATGCTCAAAATGTTTCTGATTACTTATGGAGAAACTTCTTAGGTGGAAGCTCATCTTCTCGCCCACTTGGAGATGCCGTATTGGATGGCATAGATTTTGATATAGAGTCATCTACCCCACACTTGGAGGACCTTGCACGTTACCTTAAGTCACACAGCACTGATAGCCAAAAAGTGTACCTATCTGCAGCTCCTCAATGCCCATTTCCTGATGCTAATCTTGGGACTGCCCTTAATACAGGCCTTTTTGATCATGTCTGGGTACAATTCTTCAACAACCCTCCCTGCGATTATTCAGAATCCAATACTGATGCGTTTGTCAATGCGTGGCACCAATGGGCGACATCATTAAATGGGTCGAAAATATTCCTGGGGTTGCCAGCATCTCAGGAAATAGCAGCCAGTGGCTATGTTCCTGCTGATTTGTTAACCTCTAAGGTACTTCCCGCTGTAAGGAAGTCAGCTAACTATGGAGGTGTAATGTTGTGGTCAAGGTACGAAGATAGATTGAGTGGATACAGTACGTACCTTCAGATTGGTCCTCTTTGCACACCCCAAAGCACTCCCAAATGCAGGAAACATGACAGTGGCTTTATAGAGCGTTTTGGTTACATGTCCACTGGTAGCATCAAGGTTTACGAAAGTGAGAATCTTGGTAGGCAGTGTTGTGGGATCATATGCTGGAATAATTGTTCTTGTGAGGCTTATGCACCAGTGAATCAGGTTAACAATACTGGATGCCAGATATGGCTTAAAGGAACCAGGTTCACTGAAGCTGCAGGAGAAAAAGCACAGTCAATTTATATTGTTAGAGCCAAAGTAAACAGGTGGTGGATATGGCTTATCATTGCAGTGGGAGCAAGTCTAGCATTACCTCTGATCTGCTACTTATGCTATGCCTTATTGAGAAAATACAAAGCAGAAGTGGATAGAAAAACAAAGCAAGAGAAGATATTACATGAAATTGGAGGCAATGCAATGATTTCCATGGTGTATGGCAAACCTAAAAGGAACAAGAAACATGGGAAGGAAAGAAATGAGGTTGAAATATTCAGTTTCGAGGGCATTGTGGTTGCCACAAACAATTTCTCAGATTCAAACAAGCTAGGAGAGGGTGGTTTTGGTCCTGTATATAAGGGGACACTAACCGATGGGCAGGAAGTAGCAATAAAACGACTTTCTAAAAGCTCTGGACAAGGGCTTACAGAATTCAAGAATGAGGCTAAACTCATGGCAAAATTGCAGCATACTAATCTTGTGAGGCTTTTGGGGTTTTGCATCCAAAGAGATGAAAGAATATTAGTTTATGAGTACATGTCGAACAAAAGCTTAGATTTCTATCTATTTGATGCAAGCAGAAGAAATGTACTAGATTGGGAGAAACGCTTTAGCATCATTGAAGGAATTGCTCAAGGACTTCTTTATCTACACAAATATTCAAGACTAAAAGTGATACATCGGGACTTGAAGGCAAGCAATATATTACTTGATGAAGAAATGAATCCTAAAATATCTGATTTTGGTATGGCTCGAATATTTGGACTAAGAGAATCTGAAGAAAACACAAATAGAGTAGTTGGCACACGCGGCTACATGGCTCCAGAGTATGCAATTAATGGTGTTGTTTCAATCAAAATAGACATATTCAGTTTTGGTGTGTTGCTAATAGAGATTCTCAGTGGTAAAAAGAATAACGGTCGATTTGATTTAGATCGTCCTCTTAATCTCATAGGATATGCATGGCAGCTTTGA 2088 0.4157 MTKIFLLLLFSQLNQPGSSESEAITVYWGLNGDEGNLTETCATGKYSFVVIGFLWRFGNGETPRLNLADHCDPSLSGCTTMGSEIKYCQEQGVKVMLSLGGGSAKYSLSSSEDAQNVSDYLWRNFLGGSSSSRPLGDAVLDGIDFDIESSTPHLEDLARYLKSHSTDSQKVYLSAAPQCPFPDANLGTALNTGLFDHVWVQFFNNPPCDYSESNTDAFVNAWHQWATSLNGSKIFLGLPASQEIAASGYVPADLLTSKVLPAVRKSANYGGVMLWSRYEDRLSGYSTYLQIGPLCTPQSTPKCRKHDSGFIERFGYMSTGSIKVYESENLGRQCCGIICWNNCSCEAYAPVNQVNNTGCQIWLKGTRFTEAAGEKAQSIYIVRAKVNRWWIWLIIAVGASLALPLICYLCYALLRKYKAEVDRKTKQEKILHEIGGNAMISMVYGKPKRNKKHGKERNEVEIFSFEGIVVATNNFSDSNKLGEGGFGPVYKGTLTDGQEVAIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLVRLLGFCIQRDERILVYEYMSNKSLDFYLFDASRRNVLDWEKRFSIIEGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGMARIFGLRESEENTNRVVGTRGYMAPEYAINGVVSIKIDIFSFGVLLIEILSGKKNNGRFDLDRPLNLIGYAWQL 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0905 695 FunFam Acidic endochitinase SE2 22 291 - -
Prci13g0905 695 Pfam PAN-like domain 328 364 IPR003609 -
Prci13g0905 695 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 140 148 IPR001579 GO:0004553|GO:0005975
Prci13g0905 695 Gene3D Phosphorylase Kinase; domain 1 448 550 - -
Prci13g0905 695 Pfam Protein kinase domain 476 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0905 695 SMART serkin_6 475 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0905 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 441 550 - -
Prci13g0905 695 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 551 642 - -
Prci13g0905 695 Gene3D Transferase(Phosphotransferase) domain 1 551 695 - -
Prci13g0905 695 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 234 693 - -
Prci13g0905 695 Pfam Glycosyl hydrolases family 18 24 280 IPR001223 GO:0005975
Prci13g0905 695 SUPERFAMILY Protein kinase-like (PK-like) 460 681 IPR011009 -
Prci13g0905 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 596 608 IPR008271 GO:0004672|GO:0006468
Prci13g0905 695 SUPERFAMILY (Trans)glycosidases 20 288 IPR017853 -
Prci13g0905 695 CDD GH18_hevamine_XipI_class_III 24 289 IPR045321 -
Prci13g0905 695 ProSiteProfiles Protein kinase domain profile. 475 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0905 695 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 22 292 IPR001223 GO:0005975
Prci13g0905 695 Gene3D Glycosidases 23 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0905 Prci-Chr13 7538611 7542304 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0905 5 287 Glycoside Hydrolase AT5G24090 57.042 2.30e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g0905 Glyco_hydro_18 3.5e-25 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0905 - - pcin:129290744 1409.43