Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0903 ATGACCAAAATTTTTCTACTCCTCCTTTTCTCACAACTCAATCAACCTGGCTCTTCCGAATCCGAAGCCATTACCGTTTACTGGGGTCTGAATGGTGATGAGGGTAATCTTACAGAAACGTGTGCTACAGGAAAATACTCTTTTGTAGTGATTGGCTTCCTTTGGAGGTTTGGGAATGGCGAAACCCCTCGGCTCAACCTCGCCGATCACTGTGACCCTTCTTTATCTGGGTGCACCACCATGGGCAGTGAGATCAAATATTGTCAAGAACAAGGAGTCAAGGTGATGCTCTCTCTTGGAGGAGGATCTGCGAAATACTCTTTATCTTCCTCTGAGGATGCTCAAAATGTTTCTGATTACTTATGGAGAAACTTCTTAGGTGGAAGCTCATCTTCTCGCCCACTTGGAGATGCCGTATTGGATGGCATAGATTTTGATATAGAGTCATCTACCCCACACTTGGAGGACCTTGCACGTTACCTTAAGTCACACAGCACTGATAGCCAAAAAGTGTACCTATCTGCAGCTCCTCAATGCCCATTTCCTGATGCTAATCTTGGGACTGCCCTTAATACAGGCCTTTTTGATCATGTCTGGGTACAATTCTTCAACAACCCTCCCTGCGATTATTCAGAATCCAATACTGATGCGTTTGTCAATGCGTGGCACCAATGGGCGACATCATTAAATGGGTCGAAAATATTCCTGGGGTTGCCAGCATCTCAGGAAATAGCAGCCAGTGGCTATGTTCCTGCTGATTTGTTAACCTCTAAGGTACTTCCCGCTGTAAGGAAGTCAGCTAACTATGGAGGTGTAATGTTGTGGTCAAGGTACGAAGATAGATTGAGTGGATACAGTACGTACCTTCAGATTGGTCCTCTTTGCACACCCCAAAGCACTCCCAAATGCAGGAAACATGACAGTGGCTTTATAGAGCGTTTTGGTTACATGTCCACTGGTAGCATCAAGGTTTACGAAAGTGAGAATCTTGGTAGGCAGTGTTGTGGGATCATATGCTGGAATAATTGTTCTTGTGAGGCTTATGCACCAGTGAATCAGGTTAACAATACTGGATGCCAGATATGGCTTAAAGGAACCAGGTTCACTGAAGCTGCAGGAGAAAAAGCACAGTCAATTTATATTGTTAGAGCCAAAGTAAACAGGTGGTGGATATGGCTTATCATTGCAGTGGGAGCAAGTCTAGCATTACCTCTGATCTGCTACTTATGCTATGCCTTATTGAGAAAATACAAAGCAGAAGTGGATAGAAAAACAAAGCAAGAGAAGATATTACATGAAATTGGAGGCAATGCAATGATTTCCATGGTGTATGGCAAACCTAAAAGGAACAAGAAACATGGGAAGGAAAGAAATGAGGTTGAAATATTCAGTTTCGAGGGCATTGTGGTTGCCACAAACAATTTCTCAGATTCAAACAAGCTAGGAGAGGGTGGTTTTGGTCCTGTATATAAGGGGACACTAACCGATGGGCAGGAAGTAGCAATAAAACGACTTTCTAAAAGCTCTGGACAAGGGCTTACAGAATTCAAGAATGAGGCTAAACTCATGGCAAAATTGCAGCATACTAATCTTATGCAAGCAGAAGAAATGTACTAG 1617 0.4329 MTKIFLLLLFSQLNQPGSSESEAITVYWGLNGDEGNLTETCATGKYSFVVIGFLWRFGNGETPRLNLADHCDPSLSGCTTMGSEIKYCQEQGVKVMLSLGGGSAKYSLSSSEDAQNVSDYLWRNFLGGSSSSRPLGDAVLDGIDFDIESSTPHLEDLARYLKSHSTDSQKVYLSAAPQCPFPDANLGTALNTGLFDHVWVQFFNNPPCDYSESNTDAFVNAWHQWATSLNGSKIFLGLPASQEIAASGYVPADLLTSKVLPAVRKSANYGGVMLWSRYEDRLSGYSTYLQIGPLCTPQSTPKCRKHDSGFIERFGYMSTGSIKVYESENLGRQCCGIICWNNCSCEAYAPVNQVNNTGCQIWLKGTRFTEAAGEKAQSIYIVRAKVNRWWIWLIIAVGASLALPLICYLCYALLRKYKAEVDRKTKQEKILHEIGGNAMISMVYGKPKRNKKHGKERNEVEIFSFEGIVVATNNFSDSNKLGEGGFGPVYKGTLTDGQEVAIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLMQAEEMY 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0903 538 Gene3D Phosphorylase Kinase; domain 1 448 534 - -
Prci13g0903 538 ProSiteProfiles Protein kinase domain profile. 475 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0903 538 FunFam Acidic endochitinase SE2 22 291 - -
Prci13g0903 538 SUPERFAMILY Protein kinase-like (PK-like) 460 534 IPR011009 -
Prci13g0903 538 CDD GH18_hevamine_XipI_class_III 24 289 IPR045321 -
Prci13g0903 538 SUPERFAMILY (Trans)glycosidases 20 288 IPR017853 -
Prci13g0903 538 Gene3D Glycosidases 23 291 - -
Prci13g0903 538 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 140 148 IPR001579 GO:0004553|GO:0005975
Prci13g0903 538 Pfam Glycosyl hydrolases family 18 24 280 IPR001223 GO:0005975
Prci13g0903 538 Pfam PAN-like domain 328 364 IPR003609 -
Prci13g0903 538 PANTHER ENDOCHITINASE 8 289 - -
Prci13g0903 538 Pfam Protein kinase domain 476 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0903 538 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 22 292 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0903 Prci-Chr13 7538609 7541448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0903 5 287 Glycoside Hydrolase AT5G24090 57.042 2.55e-122 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci13g0903 Glyco_hydro_18 1.9e-25 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0903 K01183 - pcin:129290744 1095.49