Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0862 ATGATCATGGCCGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCTCAGTATGTGCTTGGATCTTCCTCAATTCCCATGAATCTCTTCACTGAAACCCAAGACACTCCTCAGTCATGGAGCCAGATGCTTTTTGCTGGGCTGCCTGGAGAAAAAGAGAGAATGGGGTCGAATCTTTTTCAGAACAAGAAGATGGAAATTTGGGAAGATCACCAGAATATTCTGAATAATAATAATCCATCTTCAAGAGAAGCTCCTCCTCCTGTTATTGATGTAATCAAGCAAGAAGTTTCCCAACAAAGTGGTAACTTGTACAGCCATGGAACTGAGGAGTTTCATCATCAGCAGGCTTCAGGATCTCATGGCTCATCGTCTTATTGGTTAAACAATATGGTTCCTCAATTTATTCCTTCTAATTCTTCCCCCAAGTCTCGTGCCATCACTAGCTCAAGTAATGACACTAATATTTTGGATTTCACTTATAACAAGCCACTTCATAACAACAATCAACTGCATCGACATAGCCCATCTGAGAGTAATAATAGCTCATCAATCCCTTCTGGAGTTTGTAATAAGAAGGCTAAGGTTCAGGCATCTCCAAGCCTGCCTCCTCTCAAGGTGAGAAAGGAGAAACTAGGAGATAGAATAACAGCCCTTCATCAGCTAGTTTCCCCCTTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATTAGATTCCTCCAAGGTCAAATTGAGGCACTAAGCTTGCCTTACATGTCGAATGCATCCAAAAGCATTAGGAATCAGCGCTCTGTGCATGGAGAAAGGAATTCTGTGTTCCCGGAGGACCCGGGTCAGCTGTTGAATGACAATGGCCTCAAAAGAAAAGGAGCTTCGAAGGAGGAAGGAGAAGAAAAGGGAAAGAACTTGAGGAGCAGAGGGCTGTGCTTGGTGCCAGTGTCTTGCACTCAACATGTTGGAAGTGAAAATGGGGCTGACTACTGGGCACCTGCTTATGGCAGCGGTTTTTAA 1038 0.4422 MIMAGNPNWWSMHPPTLIPPQYVLGSSSIPMNLFTETQDTPQSWSQMLFAGLPGEKERMGSNLFQNKKMEIWEDHQNILNNNNPSSREAPPPVIDVIKQEVSQQSGNLYSHGTEEFHHQQASGSHGSSSYWLNNMVPQFIPSNSSPKSRAITSSSNDTNILDFTYNKPLHNNNQLHRHSPSESNNSSSIPSGVCNKKAKVQASPSLPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSLPYMSNASKSIRNQRSVHGERNSVFPEDPGQLLNDNGLKRKGASKEEGEEKGKNLRSRGLCLVPVSCTQHVGSENGADYWAPAYGSGF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0862 345 Gene3D - 210 273 IPR036638 GO:0046983
Prci13g0862 345 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 81 327 - -
Prci13g0862 345 MobiDBLite consensus disorder prediction 269 309 - -
Prci13g0862 345 MobiDBLite consensus disorder prediction 162 194 - -
Prci13g0862 345 CDD bHLH_AtbHLH_like 210 257 IPR045239 -
Prci13g0862 345 MobiDBLite consensus disorder prediction 162 211 - -
Prci13g0862 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 261 IPR036638 GO:0046983
Prci13g0862 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
Prci13g0862 345 FunFam Transcription factor bHLH123 family 210 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0862 Prci-Chr13 7300125 7304710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0862 160 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 58.993 5.14e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0862 - - gmx:100802121 398.667