Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0861 ATGATCATGGCCGGAAACCCTAACTGGTGGAGCATGCATCCACCAACTTTGATCCCTCCTCATGCTGGGCTGCCTGGAGAAAAAGAGAGAATGGGGTCGAATCTTTTTCAGAACAAGAAGATGGAAATTTGGGAAGATCACCAGAATATTCTGAATAATAATAATCCATCTTCAAGAGAAGCTCCTCCTCCTGTTATTGATGTAATCAAGCAAGAAGTTTCCCAACAAAGTGGTAACTTGTACAGCCATGGAACTGAGGAGTTTCATCATCAGCAGGCTTCAGGATCTCATGGCTCATCGTCTTATTGGTTAAACAATATGGTTCCTCAATTTATTCCTTCTAATTCTTCCCCCAAGTCTCGTGCCATCACTAGCTCAAGTAATGACACTAATATTTTGGATTTCACTTATAACAAGCCACTTCATAACAACAATCAACTGCATCGACATAGCCCATCTGAGAGTAATAATAGCTCATCAATCCCTTCTGGAGTTTGTAATAAGAAGGCTAAGGTTCAGGCATCTCCAAGCCTGCCTCCTCTCAAGGTGAGAAAGGAGAAACTAGGAGATAGAATAACAGCCCTTCATCAGCTAGTTTCCCCCTTCGGAAAGACTGACACAGCTTCTGTCTTGTTAGAAGCCATTGGATATATTAGATTCCTCCAAGGTCAAATTGAGGCACTAAGCTTGCCTTACATGTCGAATGCATCCAAAAGCATTAGGAATCAGCGCTCTGTGCATGGAGAAAGGAATTCTGTGTTCCCGGAGGACCCGGGTCAGCTGTTGAATGACAATGGCCTCAAAAGAAAAGGAGCTTCGAAGGAGGAAGGAGAAGAAAAGGGAAAGAACTTGAGGAGCAGAGGGCTGTGCTTGGTGCCAGTGTCTTGCACTCAACATGTTGGAAGTGAAAATGGGGCTGACTACTGGGCACCTGCTTATGGCAGCGGTTTTTAA 954 0.4413 MIMAGNPNWWSMHPPTLIPPHAGLPGEKERMGSNLFQNKKMEIWEDHQNILNNNNPSSREAPPPVIDVIKQEVSQQSGNLYSHGTEEFHHQQASGSHGSSSYWLNNMVPQFIPSNSSPKSRAITSSSNDTNILDFTYNKPLHNNNQLHRHSPSESNNSSSIPSGVCNKKAKVQASPSLPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSLPYMSNASKSIRNQRSVHGERNSVFPEDPGQLLNDNGLKRKGASKEEGEEKGKNLRSRGLCLVPVSCTQHVGSENGADYWAPAYGSGF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0861 317 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 182 233 IPR036638 GO:0046983
Prci13g0861 317 MobiDBLite consensus disorder prediction 241 281 - -
Prci13g0861 317 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 221 IPR011598 GO:0046983
Prci13g0861 317 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 60 299 - -
Prci13g0861 317 CDD bHLH_AtbHLH_like 182 229 IPR045239 -
Prci13g0861 317 MobiDBLite consensus disorder prediction 134 166 - -
Prci13g0861 317 Gene3D - 182 245 IPR036638 GO:0046983
Prci13g0861 317 MobiDBLite consensus disorder prediction 134 183 - -
Prci13g0861 317 FunFam Transcription factor bHLH123 family 182 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0861 Prci-Chr13 7300123 7304710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0861 132 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 58.993 2.78e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0861 - - gmx:100802121 347.436