Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0857 ATGGAAATCTCTGAAAAGAGTTCTGGTCTCAACTTGAACTTGAAGGAGACAGAGCTCAGACTTGGGCTTCCTGGTTGTGAGTCTCCAGAAAGAAAGTCAACAAGTGTGGTATCTCTGTTTGGGAAGGATTTGAGGAACGTTATTTCTGGGTCTAAGAGAGGCTTCTCTGATGCTATAAAAGATGGGTCCTCCAGGAAATGGGTTTTCTCTGCTAGTGATGATGGATCTGACTCCATTCTTGGTTCAGAAGGTAAAAGAAATAATGCCCACAAGCCTTCTTCTCAATCTGCCAAACCAAGCCATTATAAGAAGCCTGAGGTTTCTGCAACAAACGAGCACGCTAGTCCTCCTTCTGCAAAGGCACAGGTTGTGGGGTGGCCGCCAGTTCGATCCTTTCGGAGAAACACAATGGCTTCTAGCTTGACAAAGAACATTGAAGATGAAGAAGAGGGAAAACCAGAACCATGTGGTTGTCTTTATGTAAAAGTTAGTATGGATGGTGTTCCATATCTCAGAAAGGTTGATCTCAGAATGTACACCAACTATATGCAACTTTCTTCATCTCTTGAGCAAATGTTCAACTGTTTCACCATTGGTGAATGCAATTCTGGTGGATTTGCTGGGAAAGATGGTCTGAATGAGAGCAGATTGAAGGATCTTCTTCATGTGTGTGATTATGTTGTTACGTATGAAGACAGAGATGGAGATTGGATGCTTGTTGGCGATGTCCCATGGGAGATGTTCCCTGAATCATGTAGGAGACTGAGGATCATGAAAGGTTCTGAAGCAATTGGGCTAGCTCCCAGGGCCATGGAAAAATGCAGGAGCCACAAAAACTGCAGAAGAACCAATTAG 855 0.4374 MEISEKSSGLNLNLKETELRLGLPGCESPERKSTSVVSLFGKDLRNVISGSKRGFSDAIKDGSSRKWVFSASDDGSDSILGSEGKRNNAHKPSSQSAKPSHYKKPEVSATNEHASPPSAKAQVVGWPPVRSFRRNTMASSLTKNIEDEEEGKPEPCGCLYVKVSMDGVPYLRKVDLRMYTNYMQLSSSLEQMFNCFTIGECNSGGFAGKDGLNESRLKDLLHVCDYVVTYEDRDGDWMLVGDVPWEMFPESCRRLRIMKGSEAIGLAPRAMEKCRSHKNCRRTN 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0857 284 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 265 IPR003311 GO:0005634|GO:0006355
Prci13g0857 284 FunFam Auxin-responsive protein 154 270 - -
Prci13g0857 284 Gene3D - 155 272 - -
Prci13g0857 284 MobiDBLite consensus disorder prediction 77 123 - -
Prci13g0857 284 Pfam AUX/IAA family 16 269 IPR033389 -
Prci13g0857 284 MobiDBLite consensus disorder prediction 77 101 - -
Prci13g0857 284 SUPERFAMILY CAD & PB1 domains 158 259 - -
Prci13g0857 284 ProSiteProfiles PB1 domain profile. 158 260 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0857 Prci-Chr13 7267055 7269445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0857 161 280 B3 DNA Binding Superfamily AT5G62000 29.167 8.39e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci13g0857 AUX_IAA 2.2e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0857 K14484 - cave:132187235 346.665