Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0846 ATGCGAAGCTGGGGCAAATGGGTGTCTGAGATTCGCGAGCCTCGCAAGAAGTCGCGCATCTGGCTTGGCACCTTCGCCACCCCGGAAATGGCAGCTCGAGCCCACGACGTCGCCGCTCTGTCCATCAAAGGCAAATCTGCCATTCTCAACTTCCCTCAGATTGCCGCCGTCCTCCCCCGACCTGCCTCGTGCTCCCCACATGACATCCAAGCTGCAGCTTCTGCCGCCGCCGCCATGGTCAAGTTCGACGCCGTGAAGCCCTCGGAAACGTCAGGGTCGGAGTCGGAGTCGTCGGAGCTGAGTGAGATAGTGAAGTTACCGGATATAGAAGAAGAGAGCTTTCAGTCGGCCGAGTCAATGACCGAATTCATGTGGATAGACTCGGCAGATAGTTGGGTATTTCCGGGTATGGGCATAGGTTCGGATGATTCGGAACTGAGCTCCATTTTCTCCCAGCAATTCTCACAGGAGATGCCACTCTGGGATTGA 489 0.5665 MRSWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGKSAILNFPQIAAVLPRPASCSPHDIQAAASAAAAMVKFDAVKPSETSGSESESSELSEIVKLPDIEEESFQSAESMTEFMWIDSADSWVFPGMGIGSDDSELSSIFSQQFSQEMPLWD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0846 162 Pfam AP2 domain 2 44 IPR001471 GO:0003700|GO:0006355
Prci13g0846 162 CDD AP2 1 52 IPR001471 GO:0003700|GO:0006355
Prci13g0846 162 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Prci13g0846 162 Gene3D AP2/ERF domain 1 54 IPR036955 GO:0003700|GO:0006355
Prci13g0846 162 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Prci13g0846 162 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
Prci13g0846 162 SUPERFAMILY DNA-binding domain 2 52 IPR016177 GO:0003677
Prci13g0846 162 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0846 Prci-Chr13 7204484 7205643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0846 1 135 AP2-EREBP Transcription Factor Family AT3G16280 57.718 2.47e-44 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci13g0846 AP2 1.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0846 K09286 - pcin:129291592 300.827