Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0844 ATGGCTTCCCATGTGAGTTTTCTCTGTACTCTCACGGTCATCATCTTCTTGGCTTCCTCCATGAATGGTTCAGTCGAAGCTTCAACGCAATTCAAAGTTGGTGACGCCTTCGGCTGGCGACAACCTCCCCCTAACAACTCAGCATTTTACATCCAGTGGGCTTCGATGATCCGTTTTCATGTTTCAGATTCTCTGGTTTTTGAGTACAAGAATGACTCAGTGGTGAGTGTGGACAAATGGGATTACTATCACTGTGACGCGAGTGATCCAATCACTATGTTCAACAATGGGAATAGCAGTATCAATCTGGACCAGCCTGGTTCCTTCTACTTCATCAGTGGGCTGTATGATCATTGCAGCAACGGCCAGAAACTGATGGTCCAAGTCATATCTCCCATGTCTGTTTCTGCTCCTTCACCTTCTCATCGTCATCATAACTCAGGGACTTCACTCTCATTGCACGTTCTCACCACTTGTTTTAACTTCATGATGTTGATTGCTTTAGGCGTCTCTTCTGTCTAG 522 0.4559 MASHVSFLCTLTVIIFLASSMNGSVEASTQFKVGDAFGWRQPPPNNSAFYIQWASMIRFHVSDSLVFEYKNDSVVSVDKWDYYHCDASDPITMFNNGNSSINLDQPGSFYFISGLYDHCSNGQKLMVQVISPMSVSAPSPSHRHHNSGTSLSLHVLTTCFNFMMLIALGVSSV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0844 173 PANTHER BLUE COPPER PROTEIN 28 138 IPR039391 GO:0009055
Prci13g0844 173 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Prci13g0844 173 CDD OsENODL1_like 29 130 IPR041846 -
Prci13g0844 173 FunFam Early nodulin-like protein 1 28 134 - -
Prci13g0844 173 Gene3D - 27 134 IPR008972 -
Prci13g0844 173 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Prci13g0844 173 SUPERFAMILY Cupredoxins 28 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0844 Prci-Chr13 7179815 7180544 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0844 9 151 Phytocyanin Superfamily AT1G79800 48.966 1.12e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0844 - - pcin:129289837 358.607