Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0842 ATGGCAATGTCCTGCAAGGATGGTAAACCAGGAATGGACAACGGCAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCCCTCGAGAGGCTTTATCATGAATGTCCAAAACCCAGTTCCATTCGCCGCCAGCAGCTCATCCGTGAGTGTCCTATTCTCTCCAACATTGAGCCCAAACAAATCAAAGTTTGGTTCCAGAACAGAAGGTGCAGGGAGAAGCAAAGGAAAGAGGCCTCGCGTCTTCAAGCTGTGAACAGGAAGCTGACAGCCATGAACAAGCTTCTGATGGAGGAGAATGATAGGTTGCAGAAACAGGTCTCCCAATTGGTGTATGAAAATGGCTACTTCCGCCAACATACTCAAAACACTACGCTTGCAACCAAAGACACAAGCTGTGAATCAGCCGTGACGAGTGGCCAACACAGTTTGACAACTCAGCATCCCCGGGATGCAAGTCCTGCAGGGCTCTTGTCCATTGCAGAAGAGACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGGACTGCTGTTGAGTGGGTCCAAATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGTGTGGCAGCACGAGCCTGTGGTCTAGTGGGTCTAGAACCCACAAGAGTCGCAGAAATCCTCAAAGATCGGCCGTCATGGTTTCGTGATTGCCGAGCTGTTGATGTTCTGAATGTGCTGCCCACTGCAAATGGTGGAACTATAGAGTTGCTTTATATGCAGCTATATGCCCCAACCACATTGGCTCCTGCTCGAGACTTTTGGTTGTTGCGCTATACTTCTGTTCTAGAAGATGGAAGTTTTGTGATATGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCTCCTGTGCAGCATTTTGTGAGAGCTGAGATGCTGCCTAGTGGTTACTTAATAAGACCTTGCGAAGGGGGTGGCTCTATTATCCACATTGTTGATCATATGGATTTGGAGCCATGGAGTGTGCCAGAAGTGTTACGCCTATATGAATCATCGACAGTGCTAGCTCAGAAGAAAACGATGGCAGCCTTACGACAGCTGAGACAATTATCTCATGAGGTATCTCAGTCCAATGTCACTGGGTGGGGCAGGCGACCAGCAGCACTACGGGCACTAAGCCAGAGACTGAACCGGGGTTTCAATGAGGCACTCAATGGGTTTAGCGATGAGGGGTGGTCAATGATTGGCAATGATGGTATAGATGACGTAACAATCATGGTTAATTCATCTCCTGACAAGTTAATGGGACTTGATCTTTCCTTTGCCAATGGATTTCCATCTATCAGTAATGCTGTCTTATGTGCCAAAGCATCAATGCTATTGCAGAATGTGCCTCCAGCAATTCTCCTAAGGTTCCTACGGGAGCACAGATCGGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCATTAAAGTTGGTCCATGCAGCTTACCAGGATCTCGCGTAGGAAATTATGGAGGTCAAGTTATACTTCCTCTGGCGCACACTATTGAGCATGAAGAGTTTCTAGAAGTGATTAAATTGGAAGGGTTAGCTCATTCTCCTGAAGAAGCCATCATGCCTAGAGAGGTGTTTCTTTTGCAACTCTGCAGTGGAATGGATGAGAATGCTGTTGGCACTTGTGCTGAACTTATATTTGCTCCAATTGACGCATCCTTTGCTGATGATGCCCCACTTTTACCTTCAGGATTCCGCATTATTCCTCTTGATTCTGGGAAGGAAGCATCCAGTCCTAATCGCACTCTTGATCTTGCATCTGCACTTGACATTGGCCCCACTGGGAATAAACAATCCAATGATTATGCTGGAAACTCTGGCTGCATGAGATCTGTTATGACTATAGCATTTGAATTTGCATTTGAAAGTCACATGCAAGATCATGTTGCAACAATGGCACGGCAATATGTTCGTAGCATTATATCATCAGTCCAAAGGGTGGCATTAGCACTTTCTCCTTCACATCTGAATGCTCAAGCTGGGCTTAGGTCACCACTGGGTACTCCTGAAGCACAGACACTTGCTCGTTGGATATGTAACAGTTATAGGTGCTACTTGGGTGTGGAGCTACTCAAATCTAGTAATGAAGGAAATGATTCCATCCTCAAGTCCTTGTGGCATCACTCAGATGCAATATTGTGCTGCTCTCTGAAGGCATTGCCCGTCTTCACTTTTGCAAACCAGGCAGGGCTTGATATGCTGGAGACTACCTTAGTTGCCCTGCAAGACATCGTTTTGGAGAAGATATTTGATGAACATGGACGAAAAATCCTCTGTTCCGAGTTTCCTCAGATTATACAACAGGGTTTTGCTTGCCTGCAAGGAGGTATCTGTCTCTCGAGCATGGGGCGGCCTGTCTCCTACGAGAGAGTGGTGGCTTGGAAGGTGCTGAATGAGGAAGAGAATGCTCATTATCTGTTTTATGTTTATGAACTGGTCCTTTGTTTGATGTTATGTCTAGAGACTGAGAATTGA 2532 0.4633 MAMSCKDGKPGMDNGKYVRYTPEQVEALERLYHECPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVYENGYFRQHTQNTTLATKDTSCESAVTSGQHSLTTQHPPXDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVAEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSFVICERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPXYESSTVLAQKKTMAALRQLRQLSHEVSQSNVTGWGRRPAALRALSQRLNRGFNEALNGFSDEGWSMIGNDGIDDVTIMVNSSPDKLMGLDLSFANGFPSISNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLPGSRVGNYGGQVILPLAHTIEHEEFLEVIKLEGLAHSPEEAIMPREVFLLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSGKEASSPNRTLDLASALDIGPTGNKQSNDYAGNSGCMRSVMTIAFEFAFESHMQDHVATMARQYVRSIISSVQRVALALSPSHLNAQAGLRSPLGTPEAQTLARWICNSYRCYLGVELLKSSNEGNDSILKSLWHHSDAILCCSLKALPVFTFANQAGLDMLETTLVALQDIVLEKIFDEHGRKILCSEFPQIIQQGFACLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCXLFYVYELVLCLMLCLETEN 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0842 846 FunFam Homeobox-leucine zipper protein REVOLUTA 16 71 - -
Prci13g0842 846 CDD bZIP 68 107 - -
Prci13g0842 846 Pfam MEKHLA domain 694 829 IPR013978 -
Prci13g0842 846 Gene3D - 194 376 IPR023393 -
Prci13g0842 846 FunFam homeobox-leucine zipper protein ATHB-15 195 376 - -
Prci13g0842 846 ProSiteProfiles 'Homeobox' domain profile. 11 75 IPR001356 GO:0003677
Prci13g0842 846 Gene3D - 11 82 - -
Prci13g0842 846 SMART START_1 159 369 IPR002913 GO:0008289
Prci13g0842 846 Coils Coil 71 112 - -
Prci13g0842 846 ProSiteProfiles START domain profile. 150 365 IPR002913 GO:0008289
Prci13g0842 846 MobiDBLite consensus disorder prediction 136 155 - -
Prci13g0842 846 SMART HOX_1 13 79 IPR001356 GO:0003677
Prci13g0842 846 Pfam START domain 160 367 IPR002913 GO:0008289
Prci13g0842 846 CDD START_ArGLABRA2_like 154 369 - -
Prci13g0842 846 SUPERFAMILY Bet v1-like 159 354 - -
Prci13g0842 846 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 12 832 IPR044830 GO:0003700
Prci13g0842 846 CDD homeodomain 16 76 IPR001356 GO:0003677
Prci13g0842 846 Pfam Homeodomain 16 74 IPR001356 GO:0003677
Prci13g0842 846 SUPERFAMILY Homeodomain-like 14 79 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0842 Prci-Chr13 7131602 7137155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0842 1 789 Homeobox Transcription Factor Family AT1G52150 85.606 0.0 1414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci13g0842 START 1.9e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0842 K09338 - zju:107428556 1576.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0842 13 7131602 7137155 Prci12g2027 12 37830308 37836042 CCT
Prci13g0842 13 7131602 7137155 Prci13g0842 13 7131602 7137155 ECH