Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0839 ATGCCGGTGCTGCGTAGTGGAGTGCGCAGGGGCCGAATAGCAGCGAAGCAACAGCAAGAGAAGCAGCCTAATCCGATCGAAGAAGGCGAAGCGATTGCAACGAGGACAAGGAGGAGAAGGGCGGCGGCGGCGGCGAAGGATAACAAGCAACTGAAACAGCAACAGAAGCAGGTAGTGGTGGATGCGGTCAATGACAACGTAGTTGTCCCGGCCAAGGAGGAGGAGGCGAAAAGGGGTTTGGACGAAGCTCTTCTCCGTATTGGCACCACAGGTGGTGGGGCCAGTGGTGGTGTGGTTGGCGACTGCGGAGAGGAGAAGGAAGAGATAGAGGAGAAGAAAATGGGTGATCAGGATAGTGGAGCTCGGAGCAACGATAAGGCCAATGTTGGTGAAGATGAGGGGAACACCGCTCCTGTCCCTGAGAGGGTTCAAGTCGGTGGTTCCCCTTGGTATAAGATAGAGAAAAAACTGGGGAAGGGTGGATTTGGACAAGTATATGTTGGTCACCGTGTTAATGGTGTAAATATGAATGAGAGAACTGGACCTGGAGCTGTGGAGGTTGCATTGAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGGCCACCACATGAATGGCAAGTATACAACACTCTAGGTGGTAGTCATGGTGTGCCAAGAGTACACTACAAGGGCAGGCAAGGTGACTATTATATCATGGTTATGGATATGCTGGGACCTAGCTTGTGGGATGTCTGGAATAATAACTCTCATTCAATGTCCACTGAAATGGTTGCGTGTATTGCCATTGAAGCAATATCCATATTGGAGAAGATGCACTCGCGCGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTCGGTTCTCCAGGGACCCCAGACGAGAAAAGATTGTTTCTTGTTGATCTTGGATTAGCTTCTAGATGGCGGGATAATTCAACAGGTGTACATGTGGAATATGACCAAAGGCCAGATGTTTTTAGGGGCACTGTCCGCTATGCTAGTGTGCATGCACATTTAGGGAGAACTGCCAGCAGGAGGGATGATCTGGAATCCCTTGCTTATACGTTGATTTTCCTTCTTCGAGGTCGTCTTCCTTGGCAGGGGTTCCAGGGAGAAAACAAAGGGTTTTTTGTTTGCAAGAAGAAGATGGGAACAACTCCAGAGTGCCTGTGTTGCTTCTGCCCTCAGCCTTTTAGGCTTTTTGTTGAACATGTAGTAAATTTGAAGTTTGACGAAGATCCTAACTATGCAAAATATATTTCTCTGTTTGATGGGATTGTTGGTCCAAATCCTGACATTAGACCCATAAATACAGAAGGTGCACAAAAGCTAATTGGTCATAAGAGAGGTCGGTTGGCTATGGAAGAAGAGGACGATGAGCAACCAAAAAAGAAGTTCCGAATGGGTCTCCCAGCAACACAATGGATAAGTATATACAATGCTCGCAGACCTATGAAACAAAGATATCACTACAATGTGTCAGATGTAAGGCTTTCCCAGCACATTGAAAAGGGAAATGAGGATGGCTTGTATATAAGCAGTGTCGCTTCTTGTTCAAACCTGTGGGCCATAATCATGGATGCAGGCACTGGTTTCAGCGACCAAGTATATGAACTTTCTCCTCAGTTTCTCCATAAGGAATGGATAATGGAGCAGTGGGAAAAAAATTACTACATCAGTTCAGTTGCTGGAGCTACAAACGGGAGCTCATTAGTAATCATGTCCAAGGGCACATCATTTGTACAGCAATCTTATAAAGTTAGTGATTCATTTCCTTTCAAGTGGATTAACAAAAAATGGAGGGAAGGCTTTTATGTTACTGCAATGGCCACCTCAGGGGTCAGATGGGGAGTAGTTATGTCACGGGGTGCCGGATTTTCTGACCAGGTGGTTGAACTGGATTTCCTTTATCCCAGCGAAGGGATTCACAAGCGTTGGGATCATGGATACCGCATAACAGCGACTGCTGCAACTTGGGACCAGGCCGCCTTTGTGCTCAGTGTGCCGAGGAGGAAGCCTGCCGATGAAACACAGGAAACCCTCAGGACTACGGTTTTTCCTAGTACGCATGTTAAGGAGAAATGGGCAAAGAACCTTTACATTGCATCAGTTTGCTATGGGCGAACTGTTTCTTGA 2148 0.4683 MPVLRSGVRRGRIAAKQQQEKQPNPIEEGEAIATRTRRRRAAAAAKDNKQLKQQQKQVVVDAVNDNVVVPAKEEEAKRGLDEALLRIGTTGGGASGGVVGDCGEEKEEIEEKKMGDQDSGARSNDKANVGEDEGNTAPVPERVQVGGSPWYKIEKKLGKGGFGQVYVGHRVNGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHSMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGSPGTPDEKRLFLVDLGLASRWRDNSTGVHVEYDQRPDVFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLLRGRLPWQGFQGENKGFFVCKKKMGTTPECLCCFCPQPFRLFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKFRMGLPATQWISIYNARRPMKQRYHYNVSDVRLSQHIEKGNEDGLYISSVASCSNLWAIIMDAGTGFSDQVYELSPQFLHKEWIMEQWEKNYYISSVAGATNGSSLVIMSKGTSFVQQSYKVSDSFPFKWINKKWREGFYVTAMATSGVRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDHGYRITATAATWDQAAFVLSVPRRKPADETQETLRTTVFPSTHVKEKWAKNLYIASVCYGRTVS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0839 715 MobiDBLite consensus disorder prediction 31 46 - -
Prci13g0839 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Prci13g0839 715 PANTHER CASEIN KINASE-RELATED 143 680 - -
Prci13g0839 715 SMART serkin_6 151 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0839 715 MobiDBLite consensus disorder prediction 94 143 - -
Prci13g0839 715 ProSiteProfiles Protein kinase domain profile. 151 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0839 715 ProSitePatterns Protein kinases ATP-binding region signature. 157 190 IPR017441 GO:0005524
Prci13g0839 715 SUPERFAMILY Protein kinase-like (PK-like) 151 431 IPR011009 -
Prci13g0839 715 MobiDBLite consensus disorder prediction 101 129 - -
Prci13g0839 715 Gene3D Transferase(Phosphotransferase) domain 1 116 471 - -
Prci13g0839 715 Pfam Protein kinase domain 151 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0839 715 FunFam casein kinase 1-like protein HD16 124 471 - -
Prci13g0839 715 MobiDBLite consensus disorder prediction 1 57 - -
Prci13g0839 715 CDD STKc_CK1 151 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0839 Prci-Chr13 7081521 7086756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0839 127 309 EF-hand Containing Proteins AT2G17890 27.919 1.30e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci13g0839 Pkinase 1.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0839 - - qsa:O6P43_018208 1199.5