Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0835 ATGGCAACAGCAACATATCCGCCGCCACCGCCCTATTACAAACTCTACAAAGATTATTTGCGAGACCCTAAATCAGCTCCAGAGCCTCCCCCTCCTATAGAAGGGACTTATGTTTGTTTTGGAGGCAATTACACTACTGATGACAATCTACCAAGTTTGGAAGAGCAGGGAGTGCGCCAACTCTATCCTAAGGGTCCTGATGTTGATTATAAGAAGGAGCTGAGATCACTTAATGGAGACTTGCAGCTACACATTTTGGAGCTTGCTGATATTCTCATTGAGAGACCTTCACAGTATGCTAGAAGAGTAGAAGAAATATCTCTAGTATTCAAGAACCTGCATCATCTTCTAAATTCACTGCGCCCGCATCAGGCAAGAGCAACATTGATTCACATTTTAGAACTTCAAATACAGCGTCGTAAACAAGCAGTGGAGGACATAAAGAGAAGGAGAGAGGAAGCAAGGAGACTTCTTAATGAAGCCCTAGCAACACTAGATGGCAATTAG 507 0.4339 MATATYPPPPPYYKLYKDYLRDPKSAPEPPPPIEGTYVCFGGNYTTDDNLPSLEEQGVRQLYPKGPDVDYKKELRSLNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNEALATLDGN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0835 168 Coils Coil 130 164 - -
Prci13g0835 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
Prci13g0835 168 Gene3D - 63 159 IPR044888 -
Prci13g0835 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
Prci13g0835 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0835 Prci-Chr13 7016823 7022898 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Prci13g0835 Med7 2.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0835 K15148 - gmx:100792250 265.774