Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0833 ATGACGAGGCGGTGCTCTCACTGCAGCAATAACGGGCACAATTCACGAACATGCCCGTCCCGTGGTGGAGGTGCTGGCGGCGGAAGCGCTGGAGGTGTGAGGCTATTCGGTGTTAGACTCACCGATGGATCCATCATTAAAAAGAGCGCGAGCATGGGGAATCTCTCCGCCCATTATTATTCTTCGTCGTCCGCTGCTGGATCACCGAATCCCGGATCACCGTGCTCTGAGCCGCTCCGAGACCTGGGTCATGAGCAAGACGGGTGCTTGTCTGATGACCCCTCTCATGCCTCCAGCTCCGCGAACCGTCGTGGAGAGAGAAAGAAAGGTGTTCCATGGACTGAAGAAGAACACAAGATGTTTTTAATTGGTCTCCAGAAGCTAGGTAAAGGAGATTGGCGTGGCATATCTCGCAATTTTGTTGTGTCAAGGACTCCTACTCAAGTAGCAAGTCATGCCCAAAAGTACTTTATCCGGCAGAGTAATGCTACTAGGAGAAAGAGACGTGCCAGTCTTTTTGACATGGTTGCAAATGTGGCTTCAAATCCACCTTCAGTGCCAGAAGAACAAGTATTACTGCCACCTTCTGAGAACTCACAACCAGGTATTGCAAATTTACAACCATCAATAGATCTCAACCTCAAGTCAGAAATCGAACCCATGGAAACTAATTATGAAGAAAATGCGGAAGAGCCCAATGAAACTATGGTAGTATCAAGTGGATTGACACCAGTGGCTAGCGGATTCATGCCAACATATGTACCTGTTGCATTTTCCTTATGGCCATCAAATGCAGCTCCCTTTGAAGTTAAGGAAGCTGAGACAGCTCATCATCAGGTCCTTAAGCCAATCCCAGTCGTTCCTAAGGAACCAGTCAATATTGATGAACTTGTAGGCATGTCTCAACTGAGTCTTGGGGAAACACAAAAACGTGATAGAGAGCCTTCCCCACTTTCTTTGAAGTTGCTGGGAGAGCCCTCAAGGCAGTCAGCATTCCATGCAAATGCTGGTGGTTCAGATTTAAACAATGGCAAGAGCAGTGCAATTCAAGCAGCTTAA 1059 0.4788 MTRRCSHCSNNGHNSRTCPSRGGGAGGGSAGGVRLFGVRLTDGSIIKKSASMGNLSAHYYSSSSAAGSPNPGSPCSEPLRDLGHEQDGCLSDDPSHASSSANRRGERKKGVPWTEEEHKMFLIGLQKLGKGDWRGISRNFVVSRTPTQVASHAQKYFIRQSNATRRKRRASLFDMVANVASNPPSVPEEQVLLPPSENSQPGIANLQPSIDLNLKSEIEPMETNYEENAEEPNETMVVSSGLTPVASGFMPTYVPVAFSLWPSNAAPFEVKEAETAHHQVLKPIPVVPKEPVNIDELVGMSQLSLGETQKRDREPSPLSLKLLGEPSRQSAFHANAGGSDLNNGKSSAIQAA 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0833 352 FunFam transcription factor MYB1R1 111 162 - -
Prci13g0833 352 SMART sant 109 159 IPR001005 -
Prci13g0833 352 Gene3D - 113 162 - -
Prci13g0833 352 ProSiteProfiles Myb-like domain profile. 105 157 IPR001005 -
Prci13g0833 352 NCBIfam myb-like DNA-binding domain, SHAQKYF class 108 160 IPR006447 GO:0003677
Prci13g0833 352 MobiDBLite consensus disorder prediction 60 112 - -
Prci13g0833 352 SUPERFAMILY Homeodomain-like 107 162 IPR009057 -
Prci13g0833 352 MobiDBLite consensus disorder prediction 304 352 - -
Prci13g0833 352 MobiDBLite consensus disorder prediction 1 26 - -
Prci13g0833 352 PANTHER TRANSCRIPTION FACTOR KUA1 3 287 - -
Prci13g0833 352 MobiDBLite consensus disorder prediction 1 18 - -
Prci13g0833 352 CDD SANT 112 157 IPR001005 -
Prci13g0833 352 MobiDBLite consensus disorder prediction 332 352 - -
Prci13g0833 352 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 161 IPR017930 -
Prci13g0833 352 Pfam Myb-like DNA-binding domain 112 157 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0833 Prci-Chr13 7002235 7009631 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci13g0833 Myb_DNA-binding 1.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0833 - - qsa:O6P43_027717 511.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0833 13 7002235 7009631 Prci13g0833 13 7002235 7009631 ECH