Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0829 ATGCATCTTGTCTGGAAACGTCACTTGTATCTGCTTCAATTTCTTCTTTTTCTTCTCCACTTTCATTCCCTTTCTTCGGATACCACACCCTTGGATTGTAAGGACGCCACCCGCGTCTGCACTTCGTTCTTGGCCTTTAAGCCTCGACCAAATCAAACCTTAGCCGTAATTCAGAGCATGTTTGATGTATTGCCTAATGACATTACTGTTGAAGGCAATGGCTGGGACTACATATTTATCAAAAAGAACTGTTCTTGTGCTGCTGGCATAAACAAATACGTGTCTAGCACCACTTACACTGTAAAATCCAATGAAGGGTTGGTGTATGATTTGGTGATGAAGGCCTATGATGGGCTTGGTTTCTTGCCCAAAACGGCTAGGAGGGCAAAAAACGGCTCCGTTATAACATTGAAGTTGTTTTGTGGTTGCTCCAGTGGACCCTGGAACTATATGATGAGTTATGTGATGAGAGAAGGTGATAGTATTGAATCTCTGGCGAGTCGGTTTGGAGTTAGTATGTATAGTATAGAGACAGTAAATGGCATCAACAATCCTGACAATATCACTGTGGATTCCCTGTGTTATGTACCACTTAATTCGGTTCCTGGTGAGCCATATACCCTGAAGAATGATACTTCCTTAGCTCCTGTTCCTGCCCCTTCTATTGACAATGTTTCTGCTAGTCAAGTCAGTCATGCTCATGCACCCTACATATGGATCGTTGGGGGTTTAGGGATCAGTCTTGCTCTGATAATATTAAGCACAATTCTTTATTTCTGTGCGAGATCGTCCAATTGTTTTGCTGAAGCAAGCACAAGTCCTGAAAAGGTTGATGAAGGCAAGATCTTGCACAAATTTCATATCCTTCAAAATCCAAGTTTTTGCTGTGGTTCAGGAAGGTACATACAGGGCAAACCTGTAGAGCAGAGGCAATCTGATCGTGATTCCCGCAACAACCAGATTACTGCTCCCAAAGTTTCAACATTGGGGATTAATGTCTTTGAAGTGGAGAACCCTGTCGTTTTCACACATGAAGAGATTTGTTCTGCAACTGATGGTTTCTCTGATTCAAATCTACTTGGGCATGGTATTTATGGTTCTGTTTATTATGGCTTCCTTCGTGACCAGGAGGTTGCTATCAAAAGAATGACTGCTACAAAAACTAAAGAATTCTTGTCAGAGATGAAGGTCCTGTGCAAGGTTCATCATGCAAATCTGATAGAATTGATCGGCTATGCTGCTAGTCATGATGAGCTTTTCCTTATTTATGAATATGCCCAGAAGGGTTCACTTGGAAGCCATTTGCATGATCCACTGACCAAGGGTTCTTCCTCACTCTCTTGGATCATGAGGGTCCAGATAGCACTTGATGCTGCTAGGGGACTTGAGTACATACATGAGCACGCCAAAATCAATTACGTCCATAGAGATATCAAGACAAACAACATCTTACTTGGCGCTTCCTTTAGAGCAAAAATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGAAAGCAAATGAAGAAGAAATTACTGCCACCAAAGTTGTTGGCACATATGGTTATCTTGCACCTGAATACCTGAGCGATGGCCGTGCAACAACCAAAAGTGATGTTTATGCATTTGGCATTGTTCTTTTTGAGATGATATCAGGGAAGGAGGCCACTATTCGGACAGAAGGCTTGATGTCAAAAAATCCTGAGAGACGTTCTCTTGCATCTATTATGTTGGCAGCTCTTAGGAACTCACCTGATTCAATGAGTATGTCTAGTTTGAGAAATCATATTGATCCTAATATGATGGACCTGTATCCCCATGATTGTGTATTTAAGATGGCCATGCTGGCAAAGCAATGTGTGGATGATGATCCCATCTTAAGACCTGATATGAAACAAGTTGTGATTTCGCTCTCACAGATCCTCCTGTCTTCTATTGAGTGGGAAGCAACTCTAGCCGGCAACAGCCAAGTGTTCAGTGGGCTTGTTCAAGGAAGATAG 1995 0.4216 MHLVWKRHLYLLQFLLFLLHFHSLSSDTTPLDCKDATRVCTSFLAFKPRPNQTLAVIQSMFDVLPNDITVEGNGWDYIFIKKNCSCAAGINKYVSSTTYTVKSNEGLVYDLVMKAYDGLGFLPKTARRAKNGSVITLKLFCGCSSGPWNYMMSYVMREGDSIESLASRFGVSMYSIETVNGINNPDNITVDSLCYVPLNSVPGEPYTLKNDTSLAPVPAPSIDNVSASQVSHAHAPYIWIVGGLGISLALIILSTILYFCARSSNCFAEASTSPEKVDEGKILHKFHILQNPSFCCGSGRYIQGKPVEQRQSDRDSRNNQITAPKVSTLGINVFEVENPVVFTHEEICSATDGFSDSNLLGHGIYGSVYYGFLRDQEVAIKRMTATKTKEFLSEMKVLCKVHHANLIELIGYAASHDELFLIYEYAQKGSLGSHLHDPLTKGSSSLSWIMRVQIALDAARGLEYIHEHAKINYVHRDIKTNNILLGASFRAKISDFGLAKLVGKANEEEITATKVVGTYGYLAPEYLSDGRATTKSDVYAFGIVLFEMISGKEATIRTEGLMSKNPERRSLASIMLAALRNSPDSMSMSSLRNHIDPNMMDLYPHDCVFKMAMLAKQCVDDDPILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0829 664 SUPERFAMILY Protein kinase-like (PK-like) 332 636 IPR011009 -
Prci13g0829 664 Gene3D Phosphorylase Kinase; domain 1 329 425 - -
Prci13g0829 664 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Prci13g0829 664 SMART LysM_2 153 197 IPR018392 -
Prci13g0829 664 Pfam LysM domain 154 190 IPR018392 -
Prci13g0829 664 Pfam Protein tyrosine and serine/threonine kinase 358 634 IPR001245 GO:0004672|GO:0006468
Prci13g0829 664 Gene3D LysM domain 148 203 IPR036779 -
Prci13g0829 664 FunFam Kinase family protein 329 425 - -
Prci13g0829 664 FunFam PTI1-like tyrosine-protein kinase 3 426 650 - -
Prci13g0829 664 Gene3D Transferase(Phosphotransferase) domain 1 427 650 - -
Prci13g0829 664 SUPERFAMILY LysM domain 152 197 IPR036779 -
Prci13g0829 664 SMART serkin_6 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0829 664 ProSiteProfiles Protein kinase domain profile. 354 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0829 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Prci13g0829 664 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 46 658 IPR044812 GO:0019199|GO:0045087
Prci13g0829 664 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0829 Prci-Chr13 6976489 6982527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0829 30 664 Receptor kinase-like Gene Family AT1G51940 65.062 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci13g0829 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0829 - - pcin:129289327 1007.28