Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0828 ATGAATGGTAGTAGGTCAAGAAATGAGGAGATGTCTCCTCAGCTGCTGGATTTGATCCCAACGGACCGAGAGCGGCATGAAAACAGGGATGAGGAAAGAAGCCACCACAAGTCGTCAGAAGAGAGGAAACTTGAGCTTAGACTTGGTCCGCCTGGTGAAGAAGACTATGTCGCCAGAGGAAGAGGCGAGTCTCTGCTCTCTCTTGGTTACTCCTCAGCCTCCATTAATGGAGGCCAAACCCAGCAGAAGACTGCGTCTTCTCCTTGGGGTTCCACAGGCTACCATGAGAAGAAGACTCAGAACAATAATCAACACAAAGGGGTTTCATCATTCCTACAACCTCAACCCTCTTCTGCAAACACAGCTGTACCCAACAGCTCTCAGAAAAGAACTGCTCCTGGTCCAGTGGTGGGGTGGCCTCCAATTCGTTCATTTAGGAGGAACCTTGCAAGTAGTAGCTCTTCTAAGGTGCCTCCTCCTCATCAACATGAGTCTCAGAATCAGCATGTGGTTGAAGATAAGGTTGCTGGGAAAAAACCTGTGGCTGACAACAACGTTGTTGGTGGTAAAGGCCTGTTTGTGAAGATCAATATGGATGGAGTCCCCATAGGCAGAAAAGTGGACCTCAATGCTTACGATAGCTATGAAAAACTCTCCTTTGCTGTTGACGAACTCTTTAGAGGCCTCCTTGCTGCTCAAAGAGATTCCTGTGGTGGTGTGATTCAGAACAAGCAAGAGGAAGGGAAAGCCATCACAGGTTTATTGGATGGAAGTGGAGAACACACTCTGGTTTATGAGGATAACGAAGGAGACAGGATGCTTGTTGGGGATGTGCCGTGGCACATGTTCGTGTCAACAGTAAAGAGGCTGCGCGTATTGAAGAGTTCTGAGCTCTCTGCTTTTACTCTTGGTAGCAAGCAAGGCAAAAATACCTCTTGA 939 0.4792 MNGSRSRNEEMSPQLLDLIPTDRERHENRDEERSHHKSSEERKLELRLGPPGEEDYVARGRGESLLSLGYSSASINGGQTQQKTASSPWGSTGYHEKKTQNNNQHKGVSSFLQPQPSSANTAVPNSSQKRTAPGPVVGWPPIRSFRRNLASSSSSKVPPPHQHESQNQHVVEDKVAGKKPVADNNVVGGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSFAVDELFRGLLAAQRDSCGGVIQNKQEEGKAITGLLDGSGEHTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSKQGKNTS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0828 312 MobiDBLite consensus disorder prediction 146 165 - -
Prci13g0828 312 MobiDBLite consensus disorder prediction 1 170 - -
Prci13g0828 312 MobiDBLite consensus disorder prediction 19 60 - -
Prci13g0828 312 Gene3D - 187 306 - -
Prci13g0828 312 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 298 IPR003311 GO:0005634|GO:0006355
Prci13g0828 312 SUPERFAMILY CAD & PB1 domains 189 292 - -
Prci13g0828 312 Pfam AUX/IAA family 44 300 IPR033389 -
Prci13g0828 312 ProSiteProfiles PB1 domain profile. 191 295 IPR000270 GO:0005515
Prci13g0828 312 FunFam Auxin-responsive protein 187 307 - -
Prci13g0828 312 MobiDBLite consensus disorder prediction 67 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0828 Prci-Chr13 6947998 6951560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0828 195 306 B3 DNA Binding Superfamily AT4G23980 33.929 2.66e-13 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci13g0828 AUX_IAA 1.6e-68 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0828 K14484 - gmx:100804593 350.903