Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0824 ATGGGGAAGGCTTCCAGGTGGTTGAAGGGATTGTTGGGGATGAAGAAAGACAAGGACCGGATCGACATTTCTGGCTCATTGGTTCCTGACAAGAAGGAGAAGAAACGATGGAGTTTTGCTAAGTCAGGCAAAGATTCCAATTCGGGAACCAGTCAACCGCGTTTTCAACCTCCTGATTCCACTTGGTTTGCATCCTACATGTCGGAAACAGAGAAAGAGCAGAACAAACACGCAATTGCGGTGGCCGCTGCCACTGCCGCTGCAGCCGATGCTGCTGTCGCCGCCGCTCAGGCTGCCGTTGCGGTGGTGAGGCTCACGAGCCAAGGCAGAGGAACTCTGTTTAGTGAGAGCAGAGAAAAATGGGCGGCAGTCAAGATTCAAACCGTTTTCAGGGGCTATTTGGCGAGGAAGGCTCTGAGAGCTTTGAAAGGATTGGTCAAGATTCAAGCACTTGTTAGAGGCTATCTTGTTCGAAAGCGAGCTGCTGCAACACTCCACAGCATGCAAGCTCTGATCAGAGCTCAGACTTCAGTTCGATCAAAGCGTGCTCGTCGTTCCATTAGCAGAGACAATCGAAACCAGTCTGAATTCCGAGCTAGAAGATCAATGGATCGATTTGATGAAACAAGAAGTGAAATCCACAGTAAGAGGCTATCCACATCCTATGAACAGTCCTTCAATGGGTATGACGAGAGTCCGAAGATTGTTGAGATAGACACGTACAGGACGCAGTCGAGATCTCGGAGAATGCCAGCGACGACGACGCTATCAGAATGTGAAGAGGAAACACCGTATCAAACGACGCCGTTTCCTGATAGTAAGCATCTTCAAGACTTCGAGTGGTGCTTCACCGGCGACGAATGCAGGTTCTCCACAGCCCAGAGCACTCCCCGATTCGCAAGCTGCATGCGTGCTCACAACGCCCCCCCGACGCCGGCGAAGAGCTTCTGCGGCGATACGCTTTGCCGTCCGTACTATAATTTCCCGAACTACATGGCGAATACGCAGTCGTTTAAGGCAAAACTGAGGTCGCACAGTGCCCCGAAGCAGAGGCCAGAACCGAAGAAGAGGCTTTCTCTGAATGAAATAATGGCGGCAAGAAACAGCATAAGCAGCGTCAGAATGCAGAGATCGTCCTGCTCTCAAGTTCAAGAAGAGTCATGGAATTTCTGA 1173 0.509 MGKASRWLKGLLGMKKDKDRIDISGSLVPDKKEKKRWSFAKSGKDSNSGTSQPRFQPPDSTWFASYMSETEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGTLFSESREKWAAVKIQTVFRGYLARKALRALKGLVKIQALVRGYLVRKRAAATLHSMQALIRAQTSVRSKRARRSISRDNRNQSEFRARRSMDRFDETRSEIHSKRLSTSYEQSFNGYDESPKIVEIDTYRTQSRSRRMPATTTLSECEEETPYQTTPFPDSKHLQDFEWCFTGDECRFSTAQSTPRFASCMRAHNAPPTPAKSFCGDTLCRPYYNFPNYMANTQSFKAKLRSHSAPKQRPEPKKRLSLNEIMAARNSISSVRMQRSSCSQVQEESWNF 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0824 390 MobiDBLite consensus disorder prediction 181 214 - -
Prci13g0824 390 SMART iq_5 141 162 IPR000048 GO:0005515
Prci13g0824 390 SMART iq_5 118 140 IPR000048 GO:0005515
Prci13g0824 390 MobiDBLite consensus disorder prediction 42 59 - -
Prci13g0824 390 PANTHER IQ-DOMAIN 5-RELATED 1 361 - -
Prci13g0824 390 Pfam IQ calmodulin-binding motif 121 140 IPR000048 GO:0005515
Prci13g0824 390 Pfam IQ calmodulin-binding motif 146 160 IPR000048 GO:0005515
Prci13g0824 390 Pfam Protein of unknown function (DUF4005) 296 378 IPR025064 -
Prci13g0824 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 161 IPR027417 -
Prci13g0824 390 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Prci13g0824 390 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Prci13g0824 390 Gene3D - 99 144 - -
Prci13g0824 390 MobiDBLite consensus disorder prediction 34 59 - -
Prci13g0824 390 MobiDBLite consensus disorder prediction 242 270 - -
Prci13g0824 390 MobiDBLite consensus disorder prediction 183 214 - -
Prci13g0824 390 MobiDBLite consensus disorder prediction 245 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0824 Prci-Chr13 6926967 6930028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0824 1 375 IQD Protein Family AT3G16490 58.763 4.40e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0824 - - gmx:100797686 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0824 13 6926967 6930028 Prci13g0824 13 6926967 6930028 ECH