Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0816 ATGAATACCAGTCACAGAGAAGTACTTGTTCTACTCTTAGCATTTTTCTTCCTGACAAGAGCGAATGCACAAGATACACTTGTGCCTGCAATCATAACCTTTGGTGATTCTGCAGTTGATGTGGGGAATAATGACTATTTGCCCACTCTTTTCAAGGCAAATTACCCTCCTTATGGAAGAGATTTTGTCAACCATCAAGCCACTGGAAGGTTTTGCAATGGAAAATTAGCTACTGATATTACAGCTGAAACTTTGGGATTTAAGAGTTATCCACCTGCATATCTTAGCCCACAGGCGTCAGGGAAGAATCTTCTTATTGGAGCAAATTTTGCTTCAGCTGCCTCTGGTTATGATGAGAAAGCTGCTGTTCTGAGTCATGCGATACCATTGTCTCAACAATTAGACTACTTCAAGGAATACCAAAGCAAGTTGAACAAGGTTGCTGGCAGTCAAAAGGCAGCTTCAATCATCAAGGGTGCATTGTACTTATTGAGTGCTGGAAGCAGTGACTTTTTGCAAAATTACTATGTCAGTCCTTGGATCAACAAAGCCTTCACTCCAGATCAGTATGGCTCATACCTTCTGGGATCATTCACAAGCTTTATCAAGGGATTGTATGGATTGGGAGCTAGGAAAATTGGAGTGACTTCACTCCCTCCACTGGGTTGCCTACCTGCTGCAAGAACTTTGTTTGGATATCATGAGAACGGATGTGTCTCAAGGCTGAATACTGATGCACAAGCATTTAACAAAAAGATCAGCTCTGCAGCGGCAAATCTCCAAAAGCAACTTCCTGGTCTCAAGCTAGTTATCTTTGATATTTATAAGCCTCTCAATGACCTTGTTCAGTCACCTTCAAAATATGGTTTTGTGGAGGCAAGGAGAGGTTGTTGCGGTACTGGAACTGTAGAGACGACAATATTATTGTGCAATCCAAAGTCACCAGGGACTTGTTCTAATGCTACCCAGTATGTGTTCTGGGACAGTGTCCATCCTTCTCAAGCTGCTAACCAGGTTGTAGCTGATGCCCTGCTTTTACAAGGCATATCCCTTATCTCATAA 1062 0.4237 MNTSHREVLVLLLAFFFLTRANAQDTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNHQATGRFCNGKLATDITAETLGFKSYPPAYLSPQASGKNLLIGANFASAASGYDEKAAVLSHAIPLSQQLDYFKEYQSKLNKVAGSQKAASIIKGALYLLSAGSSDFLQNYYVSPWINKAFTPDQYGSYLLGSFTSFIKGLYGLGARKIGVTSLPPLGCLPAARTLFGYHENGCVSRLNTDAQAFNKKISSAAANLQKQLPGLKLVIFDIYKPLNDLVQSPSKYGFVEARRGCCGTGTVETTILLCNPKSPGTCSNATQYVFWDSVHPSQAANQVVADALLLQGISLIS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0816 353 Pfam GDSL-like Lipase/Acylhydrolase 31 344 IPR001087 GO:0016788
Prci13g0816 353 SUPERFAMILY SGNH hydrolase 148 344 - -
Prci13g0816 353 PANTHER GDSL ESTERASE/LIPASE EXL3 16 344 - -
Prci13g0816 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Prci13g0816 353 Gene3D SGNH hydrolase 17 348 IPR036514 -
Prci13g0816 353 FunFam GDSL esterase/lipase APG 20 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0816 Prci-Chr13 6896869 6899020 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0816 8 345 Pollen Coat Proteome AT1G75910 36.070 2.90e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0816 - - vun:114167332 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0816 13 6896869 6899020 Prci13g0816 13 6896869 6899020 ECH