Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0809 ATGCGGAGAACTAGAATCTGGTATCAGACTGATTCGAATTTTACTGAAACTGGTACAAATTTTAAGGTTTCATTGAGCACAAACAGAGATTTTGATACTTTTGGGGGACTTTTGATTTGGCTCAGAAGCTTCCTAGAAGGAAGAAGGAACTGCTACAACTTAAAACGAAAACAAGGCAAGAACAACACGTACAAGGATGACATCTACGATCGCATGTGGCGCCAGATTAATGTTAAATCATGGCATCCATTCAATAGCTCTGTAGATATTCATACTCAAGGCATAAACGATTCTTATAAATTACCTGCAGCTCAAGGTTATGTTCGTTTTAACATTAGTGCAACATTAGAATCCGATGCTCCCCCCATCCTCATTGCTTTTGAGGCTTTTAAACTGATATCTCCGTTACCTTCCCGACGGACAAGCAAGATGGAATTTGAGCGCAAGCAAATTGACAGGAAACATGATTACGTCATTCTCACAACTTATAGAGTTAGAGTCATTGTAAGTATAAAACAGGATTTATCGTATAACGACTTGTCAGGATCGCTGCCAGAATTTCTAGCTTATTTGCCAAAGTTGAAACTCCTTAATTTGACTGGCAACAAGCTAACGGGCTCAATTCCTAAGGCTCTTAAAGAGAAGTCAGATGTAAATTTGCGATTGAGTTTGTTTGATAATCCTGGTCTTTGTTTGGCGGATTCATGCAAAAAGAAGAAGTTTGTTATTCCACTTACTGCATCAATTTCAGTCTTGATCGTAATCCTCTTGGTTTCTCCAGTGGTGTGGATCGTCAAAATGAAAAATCTTAAAGTCAAGATCACTGATAACTTTCAAAACTTGATTGGGGAAGGAGAATTTGGAAAGGTTTATTCTGGAACTCTCACAAATAGTACTCGAATTGCTGTTAAAGTACTCTCTCAATCATCCATGCAGGGTTACATGGAATTTCGATCTGAGGTAAAACTCTTAATGGTTGTTCATCATAGACATTTAGTTTCTCTGATGGGCTACTGTGAAGAAGGTATAGTGAGGGCATTAATTTATGAATATATGGCTAATGGAAACCTTCAACAACATTTATCAGATAAAAAACCAAATGTTTTGAAATGGAATGAGAGGCTTCAAATTGCATTGGATGGTGCACAAGGACTAGATTATTTGCATAATGGTTGTAAGCCACCAATAGTCCATAGAGATTTAAAAACTTCCAATATTTTACTAAATGAGAATATACAAGCCAAGATTTCTGATTTTGGGCTATCTAGAGCTTATGTAAATGACATCGACACTTACATGTCAACCCACCCCGTTGGAACACTTGGTTATGTCGATCCTGAGTGA 1344 0.375 MRRTRIWYQTDSNFTETGTNFKVSLSTNRDFDTFGGLLIWLRSFLEGRRNCYNLKRKQGKNNTYKDDIYDRMWRQINVKSWHPFNSSVDIHTQGINDSYKLPAAQGYVRFNISATLESDAPPILIAFEAFKLISPLPSRRTSKMEFERKQIDRKHDYVILTTYRVRVIVSIKQDLSYNDLSGSLPEFLAYLPKLKLLNLTGNKLTGSIPKALKEKSDVNLRLSLFDNPGLCLADSCKKKKFVIPLTASISVLIVILLVSPVVWIVKMKNLKVKITDNFQNLIGEGEFGKVYSGTLTNSTRIAVKVLSQSSMQGYMEFRSEVKLLMVVHHRHLVSLMGYCEEGIVRALIYEYMANGNLQQHLSDKKPNVLKWNERLQIALDGAQGLDYLHNGCKPPIVHRDLKTSNILLNENIQAKISDFGLSRAYVNDIDTYMSTHPVGTLGYVDPE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0809 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 396 408 IPR008271 GO:0004672|GO:0006468
Prci13g0809 447 ProSiteProfiles Protein kinase domain profile. 276 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0809 447 SUPERFAMILY Protein kinase-like (PK-like) 264 447 IPR011009 -
Prci13g0809 447 Pfam Malectin-like domain 3 61 IPR024788 -
Prci13g0809 447 Gene3D Phosphorylase Kinase; domain 1 282 352 - -
Prci13g0809 447 SUPERFAMILY L domain-like 174 237 - -
Prci13g0809 447 Pfam Protein tyrosine and serine/threonine kinase 278 442 IPR001245 GO:0004672|GO:0006468
Prci13g0809 447 Gene3D Transferase(Phosphotransferase) domain 1 353 447 - -
Prci13g0809 447 PANTHER OS07G0107800 PROTEIN-RELATED 173 447 - -
Prci13g0809 447 FunFam Os07g0541700 protein 352 440 - -
Prci13g0809 447 SMART serkin_6 276 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0809 447 ProSitePatterns Protein kinases ATP-binding region signature. 282 304 IPR017441 GO:0005524
Prci13g0809 447 Gene3D Ribonuclease Inhibitor 171 223 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0809 Prci-Chr13 6776815 6784747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0809 172 447 Receptor kinase-like Gene Family AT2G19230 51.171 4.97e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0809 PK_Tyr_Ser-Thr 4.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0809 - - pcin:129289831 865.914