Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0807 ATGTCAGAGCTAACTTCCCCGACGGACCAAAGAGATGCGGATACCATTGTGGATATCAAAAATACATACAAGATCTCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCGGAAGAATATGCATGGGGGGGACTTGGCTGCAGTCCCAGTATAAATAACTCCAACACAAGGGTAACCTCACTAAACTTGAGCGTGAGCAGGTTGACAGGACGCATAGCTACTTCATTCTCACAACTTACAGAGTTAGAATCCTTGGATCTATCAGGTAACGACTTAACCGGAGAAGTACCAGAATTTCTAGTTGAATTGCCGAACTTGAGAATCCTTAATTTGAGTGGCAACAAGCTAACAGGTTCAATTCCCAAAGGTCTTAAGGACAAGTCAGATTTGGATATGAGGTTGGATGATAATCCTGGTCTTTGCTTGACGGATCCATGCAAAAAACATAAGTTCGTTATTCCACTTATAGCATCTGCTTCAGCTCTTTTGGCTGTTGTAATATTGGTTTCTCTAGGAATGTGGGTCTTCAAAATGAAAGGACTTAAAGTGAAATTTACTAAGCATGAATCATCAAAACTTAGAAAGCGAGCATTTTCTTACTCCATCGTTCTTGATATCACGAATAACTTACAAAACTTGATTGGAGAAGGAGGATTTGGTAAGGTTTATTTAGGCACTCTTAAGAATGATAATACTCAAGTTGCTGTAAAGTTACTTTCTCCGTCATCAGTGCAAGGTGATAAAGAATTTCGATCGGAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTGGTTTCATTGATTGGATATTGTGAAAAAAGGGGCGCCAGGGCATTAATTTATGAGTATATGGCCAATGGCGACCTCCGCCGGCATTTATCAGGTAACCATGGGGATTCTTTGAAATGGAACGACAGGCTTCAAATTGCATTGGATGCAGCGTGTGGATTAGATTATTTGCATAATGGATGTAAGCCTGCAATAGTGCACAGAGATCTAAAGACTACTAACATTTTGCTAGATGAAAATATGGAAGCTAAGATTGCTGATTTTGGATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCACGTCTCAACTCGTCCTGCTGGAACAATTGGCTATCTTGATCCTGAGTTTCAAAATTCCGGCAACCTCACCAAAGGGAGTGATATTTATAGTTTTGAAATAATTTTGCTAGAATTAATCACTGGGAAACCAGCAGCAAAAAGAAGAGCAGACAATACCTTGACTCTCCTACTTCATTGGGTTACCCCTAAAGTTGAAAGCAAGGATATTCAGTCCATTGTTGATCCAAGGTTACAAGGACAATACAATGTTGACAGTGCTTGGAAATTTCTAGACATAGCCGTGTCATGCACTGCACCATCTGCGGTTCAAAGGCCTGACATAACTCAAGTGGTAGTTGAACTAAGGGATTGTTTGGGCATGGAGATAAGAATGGGAAGGACCAGCGACAATCCCAATTCAAGTAGTTCTATGGATATGAGCACAGGGCAGTTTGATTCACAGCTCAGTGCTCTGTCTGCTAGATAG 1560 0.4064 MSELTSPTDQRDADTIVDIKNTYKISKVDWQGDPCVPEEYAWGGLGCSPSINNSNTRVTSLNLSVSRLTGRIATSFSQLTELESLDLSGNDLTGEVPEFLVELPNLRILNLSGNKLTGSIPKGLKDKSDLDMRLDDNPGLCLTDPCKKHKFVIPLIASASALLAVVILVSLGMWVFKMKGLKVKFTKHESSKLRKRAFSYSIVLDITNNLQNLIGEGGFGKVYLGTLKNDNTQVAVKLLSPSSVQGDKEFRSEVELLMVVHHRHLVSLIGYCEKRGARALIYEYMANGDLRRHLSGNHGDSLKWNDRLQIALDAACGLDYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTIGYLDPEFQNSGNLTKGSDIYSFEIILLELITGKPAAKRRADNTLTLLLHWVTPKVESKDIQSIVDPRLQGQYNVDSAWKFLDIAVSCTAPSAVQRPDITQVVVELRDCLGMEIRMGRTSDNPNSSSSMDMSTGQFDSQLSALSAR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0807 519 ProSiteProfiles Protein kinase domain profile. 208 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0807 519 PRINTS Leucine-rich repeat signature 103 116 - -
Prci13g0807 519 PRINTS Leucine-rich repeat signature 82 95 - -
Prci13g0807 519 SUPERFAMILY Protein kinase-like (PK-like) 196 505 IPR011009 -
Prci13g0807 519 ProSitePatterns Protein kinases ATP-binding region signature. 214 237 IPR017441 GO:0005524
Prci13g0807 519 Gene3D Phosphorylase Kinase; domain 1 214 285 - -
Prci13g0807 519 Pfam Leucine rich repeat 57 116 IPR001611 GO:0005515
Prci13g0807 519 Gene3D Transferase(Phosphotransferase) domain 1 286 498 - -
Prci13g0807 519 Pfam Protein tyrosine and serine/threonine kinase 210 479 IPR001245 GO:0004672|GO:0006468
Prci13g0807 519 PANTHER OS07G0107800 PROTEIN-RELATED 5 489 - -
Prci13g0807 519 ProSiteProfiles Leucine-rich repeat profile. 105 127 IPR001611 GO:0005515
Prci13g0807 519 CDD STKc_IRAK 214 479 - -
Prci13g0807 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Prci13g0807 519 MobiDBLite consensus disorder prediction 491 519 - -
Prci13g0807 519 SUPERFAMILY L domain-like 52 127 - -
Prci13g0807 519 Gene3D Ribonuclease Inhibitor 14 139 IPR032675 -
Prci13g0807 519 SMART serkin_6 208 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0807 519 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 285 491 - -
Prci13g0807 519 FunFam receptor-like protein kinase FERONIA 177 284 - -
Prci13g0807 519 MobiDBLite consensus disorder prediction 489 519 - -
Prci13g0807 519 FunFam Leucine-rich repeat receptor-like kinase 11 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0807 Prci-Chr13 6719805 6724237 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0807 6 517 Receptor kinase-like Gene Family AT1G49100 45.747 4.24e-154 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0807 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0807 - - pcin:129289896 736.102