Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci13g0807 | ATGTCAGAGCTAACTTCCCCGACGGACCAAAGAGATGCGGATACCATTGTGGATATCAAAAATACATACAAGATCTCCAAAGTAGATTGGCAAGGTGACCCATGTGTTCCGGAAGAATATGCATGGGGGGGACTTGGCTGCAGTCCCAGTATAAATAACTCCAACACAAGGGTAACCTCACTAAACTTGAGCGTGAGCAGGTTGACAGGACGCATAGCTACTTCATTCTCACAACTTACAGAGTTAGAATCCTTGGATCTATCAGGTAACGACTTAACCGGAGAAGTACCAGAATTTCTAGTTGAATTGCCGAACTTGAGAATCCTTAATTTGAGTGGCAACAAGCTAACAGGTTCAATTCCCAAAGGTCTTAAGGACAAGTCAGATTTGGATATGAGGTTGGATGATAATCCTGGTCTTTGCTTGACGGATCCATGCAAAAAACATAAGTTCGTTATTCCACTTATAGCATCTGCTTCAGCTCTTTTGGCTGTTGTAATATTGGTTTCTCTAGGAATGTGGGTCTTCAAAATGAAAGGACTTAAAGTGAAATTTACTAAGCATGAATCATCAAAACTTAGAAAGCGAGCATTTTCTTACTCCATCGTTCTTGATATCACGAATAACTTACAAAACTTGATTGGAGAAGGAGGATTTGGTAAGGTTTATTTAGGCACTCTTAAGAATGATAATACTCAAGTTGCTGTAAAGTTACTTTCTCCGTCATCAGTGCAAGGTGATAAAGAATTTCGATCGGAGGTAGAACTTTTGATGGTTGTTCATCATAGACACTTGGTTTCATTGATTGGATATTGTGAAAAAAGGGGCGCCAGGGCATTAATTTATGAGTATATGGCCAATGGCGACCTCCGCCGGCATTTATCAGGTAACCATGGGGATTCTTTGAAATGGAACGACAGGCTTCAAATTGCATTGGATGCAGCGTGTGGATTAGATTATTTGCATAATGGATGTAAGCCTGCAATAGTGCACAGAGATCTAAAGACTACTAACATTTTGCTAGATGAAAATATGGAAGCTAAGATTGCTGATTTTGGATTGTCTAGAGCTTTTGCAAATGATATTGATAGTCACGTCTCAACTCGTCCTGCTGGAACAATTGGCTATCTTGATCCTGAGTTTCAAAATTCCGGCAACCTCACCAAAGGGAGTGATATTTATAGTTTTGAAATAATTTTGCTAGAATTAATCACTGGGAAACCAGCAGCAAAAAGAAGAGCAGACAATACCTTGACTCTCCTACTTCATTGGGTTACCCCTAAAGTTGAAAGCAAGGATATTCAGTCCATTGTTGATCCAAGGTTACAAGGACAATACAATGTTGACAGTGCTTGGAAATTTCTAGACATAGCCGTGTCATGCACTGCACCATCTGCGGTTCAAAGGCCTGACATAACTCAAGTGGTAGTTGAACTAAGGGATTGTTTGGGCATGGAGATAAGAATGGGAAGGACCAGCGACAATCCCAATTCAAGTAGTTCTATGGATATGAGCACAGGGCAGTTTGATTCACAGCTCAGTGCTCTGTCTGCTAGATAG | 1560 | 0.4064 | MSELTSPTDQRDADTIVDIKNTYKISKVDWQGDPCVPEEYAWGGLGCSPSINNSNTRVTSLNLSVSRLTGRIATSFSQLTELESLDLSGNDLTGEVPEFLVELPNLRILNLSGNKLTGSIPKGLKDKSDLDMRLDDNPGLCLTDPCKKHKFVIPLIASASALLAVVILVSLGMWVFKMKGLKVKFTKHESSKLRKRAFSYSIVLDITNNLQNLIGEGGFGKVYLGTLKNDNTQVAVKLLSPSSVQGDKEFRSEVELLMVVHHRHLVSLIGYCEKRGARALIYEYMANGDLRRHLSGNHGDSLKWNDRLQIALDAACGLDYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTIGYLDPEFQNSGNLTKGSDIYSFEIILLELITGKPAAKRRADNTLTLLLHWVTPKVESKDIQSIVDPRLQGQYNVDSAWKFLDIAVSCTAPSAVQRPDITQVVVELRDCLGMEIRMGRTSDNPNSSSSMDMSTGQFDSQLSALSAR | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci13g0807 | 519 | ProSiteProfiles | Protein kinase domain profile. | 208 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci13g0807 | 519 | PRINTS | Leucine-rich repeat signature | 103 | 116 | - | - | |
Prci13g0807 | 519 | PRINTS | Leucine-rich repeat signature | 82 | 95 | - | - | |
Prci13g0807 | 519 | SUPERFAMILY | Protein kinase-like (PK-like) | 196 | 505 | IPR011009 | - | |
Prci13g0807 | 519 | ProSitePatterns | Protein kinases ATP-binding region signature. | 214 | 237 | IPR017441 | GO:0005524 | |
Prci13g0807 | 519 | Gene3D | Phosphorylase Kinase; domain 1 | 214 | 285 | - | - | |
Prci13g0807 | 519 | Pfam | Leucine rich repeat | 57 | 116 | IPR001611 | GO:0005515 | |
Prci13g0807 | 519 | Gene3D | Transferase(Phosphotransferase) domain 1 | 286 | 498 | - | - | |
Prci13g0807 | 519 | Pfam | Protein tyrosine and serine/threonine kinase | 210 | 479 | IPR001245 | GO:0004672|GO:0006468 | |
Prci13g0807 | 519 | PANTHER | OS07G0107800 PROTEIN-RELATED | 5 | 489 | - | - | |
Prci13g0807 | 519 | ProSiteProfiles | Leucine-rich repeat profile. | 105 | 127 | IPR001611 | GO:0005515 | |
Prci13g0807 | 519 | CDD | STKc_IRAK | 214 | 479 | - | - | |
Prci13g0807 | 519 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 329 | 341 | IPR008271 | GO:0004672|GO:0006468 | |
Prci13g0807 | 519 | MobiDBLite | consensus disorder prediction | 491 | 519 | - | - | |
Prci13g0807 | 519 | SUPERFAMILY | L domain-like | 52 | 127 | - | - | |
Prci13g0807 | 519 | Gene3D | Ribonuclease Inhibitor | 14 | 139 | IPR032675 | - | |
Prci13g0807 | 519 | SMART | serkin_6 | 208 | 483 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci13g0807 | 519 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 285 | 491 | - | - | |
Prci13g0807 | 519 | FunFam | receptor-like protein kinase FERONIA | 177 | 284 | - | - | |
Prci13g0807 | 519 | MobiDBLite | consensus disorder prediction | 489 | 519 | - | - | |
Prci13g0807 | 519 | FunFam | Leucine-rich repeat receptor-like kinase | 11 | 142 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci13g0807 | Prci-Chr13 | 6719805 | 6724237 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci13g0807 | 6 | 517 | Receptor kinase-like Gene Family | AT1G49100 | 45.747 | 4.24e-154 | 460 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Prci13g0807 | PK_Tyr_Ser-Thr | 2.1e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci13g0807 | - | - | pcin:129289896 | 736.102 |