Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0806 ATGTTTACCTTTGAATTTGAGCAGCAAGAAACATCTAAGAAAAGGATCATGGATGTTACTTTCAATGATAAGAGCATCCTCACAGAGCCCTTTACTACTCAACATCTGAAGCTAGTCACAATCGTTCAGAATATCACACAAGCAGACCATCTTCGTATTGTGATCAAACCCACACCAGAATTTGATTTACCAGCCATGATTAATGCATTTGAGGTTTATAGAGTACTAAATCTACCTGATTCAGGAACTTATCAAGAAGATGCTGATGCTCTTTGGAGTATTAAACATATTTATGAGATCCCCATCATGAATTGGCAAGGAGACCCTTGCATTCCAAATCATTTTGCTTGGGAAGGGCTCACTTACACCTCTGATGGCAATCCAAGGGTCATTTCACTGAACTTGAGTTCAAGGGGACTAACAGGGCTGATAGATGTTTCATTTTCAAGATTCACTAAACTACAATCCTTGGATTTGTCATGTAACAAACTGAACGGAGAAGTGCCAGAATTTTTTGCACAGTTATCAAATCTGAAATTCCTGGAATCAGCTCACAGGTTCAGTACACAAATCACTGTTGCTAAAGTCAAATACCACTCTTTCATTGAGATTGGAAAGAAATCCAGGTCTTTGTCTGGCTGGATCATGCAAGACAAAGAAGTTTCTTGCTCTACTCATTGCATCCAGCATTTCGCAGTTCTAGTAATGATTGTCCTTATTTTCTTGATGATCCGGAGAATCAAGATAGAAAAAAGGAGGATGGTAGAGAAGTTGCTGTCAAGCTACTTTCTCAGACATCAAGGCAAGGAGATAGGGAGTTTCACTCAGAGACAAACACTTCAAAATTTTCAACATTTTCCTTATATGCATCAAGTTAAGTTCAAATTGCGGGTAAGTTTGTTAACTATCGTTTACCATAAAAACCTGGTTTCTTTTGTTGGCTACTGTGACGAAGGTGATGTGAAAGCATTGATCTATGAATATATGGCTCAGGGTAATCTGCAAGGGCTATTGTCAGAGAGAAACCCAAATGTTTTGAATTGGTCTGAAAGACTTCAAATTGCTGCGGATGTTGCAAAAGGTGTATGGTGCTTAATGGAAACGCAGGATTGGATTATTTGCATAATGGTATTAGGCCACCTGTAG 1146 0.3874 MFTFEFEQQETSKKRIMDVTFNDKSILTEPFTTQHLKLVTIVQNITQADHLRIVIKPTPEFDLPAMINAFEVYRVLNLPDSGTYQEDADALWSIKHIYEIPIMNWQGDPCIPNHFAWEGLTYTSDGNPRVISLNLSSRGLTGLIDVSFSRFTKLQSLDLSCNKLNGEVPEFFAQLSNLKFLESAHRFSTQITVAKVKYHSFIEIGKKSRSLSGWIMQDKEVSCSTHCIQHFAVLVMIVLIFLMIRRIKIEKRRMVEKLLSSYFLRHQGKEIGSFTQRQTLQNFQHFPYMHQVKFKLRVSLLTIVYHKNLVSFVGYCDEGDVKALIYEYMAQGNLQGLLSERNPNVLNWSERLQIAADVAKGVWCLMETQDWIICIMVLGHL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0806 381 Pfam Leucine rich repeat 131 181 IPR001611 GO:0005515
Prci13g0806 381 SUPERFAMILY L domain-like 85 181 - -
Prci13g0806 381 SUPERFAMILY Protein kinase-like (PK-like) 290 367 IPR011009 -
Prci13g0806 381 Gene3D Transferase(Phosphotransferase) domain 1 274 376 - -
Prci13g0806 381 Gene3D Ribonuclease Inhibitor 87 199 IPR032675 -
Prci13g0806 381 Pfam Malectin-like domain 5 75 IPR024788 -
Prci13g0806 381 PANTHER OS07G0107800 PROTEIN-RELATED 5 362 - -
Prci13g0806 381 Pfam Protein tyrosine and serine/threonine kinase 291 366 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0806 Prci-Chr13 6713714 6718649 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0806 63 362 Receptor kinase-like Gene Family AT1G51880 34.795 1.49e-48 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0806 PK_Tyr_Ser-Thr 5.5e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0806 - - pcin:129291624 716.457