Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0805 ATGTTTACCTTTGAATTTGAGCAGCAAGAAACATCTAAGAAAAGGATCATGGATGTTACTTTCAATGATAAGAGCATCCTCACAGAGCCCTTTACTACTCAACATCTGAAGCTAGTCACAATCGTTCAGAATATCACACAAGCAGACCATCTTCGTATTGTGATCAAACCCACACCAGAATTTGATTTACCAGCCATGATTAATGCATTTGAGGTTTATAGAGTACTAAATCTACCTGATTCAGGAACTTATCAAGAAGATGCTGATGCTCTTTGGAGTATTAAACATATTTATGAGATCCCCATCATGAATTGGCAAGGAGACCCTTGCATTCCAAATCATTTTGCTTGGGAAGGGCTCACTTACACCTCTGATGGCAATCCAAGGGTCATTTCACTGAACTTGAGTTCAAGGGGACTAACAGGGCTGATAGATGTTTCATTTTCAAGATTCACTAAACTACAATCCTTGGATTTGTCATGTAACAAACTGAACGGAGAAGTGCCAGAATTTTTTGCACAGTTATCAAATCTGAAATTCCTGGAATCAGCTCACAGGTTCAGTACACAAATCACTGTTGCTAAAGTCAAATACCACTCTTTCATTGAGATTGGAAAGAAATCCAGGTCTTTGTCTGGCTGGATCATGCAAGACAAAGAAGTTTCTTGCTCTACTCATTGCATCCAGCATTTCGCAGTTCTAGTAATGATTGTCCTTATTTTCTTGATGATCCGGAGAATCAAGATAGAAAAAAGGAGGATGGTAGAGAAGTTGCTGTCAAGCTACTTTCTCAGACATCAAGGCAAGGAGATAGGGAGTTTCACTCAGAGACAAACACTTCAAAATTTTCAACATTTTCCTTATATGCATCAAGTTAAGTTCAAATTGCGGGGTAATCTGCAAGGGCTATTGTCAGAGAGAAACCCAAATGTTTTGAATTGGTCTGAAAGACTTCAAATTGCTGCGGATGTTGGATTGGATTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACTACCAATATTTTACTGAATGAAAAGATGCAAGTTAAGATTTCTGACTTTGGCCTTTGTAGATCTTTTGCAAATGAAAATGACAATCATATACCAACTGTACTAGCTGGCACGTTCGGTTATCTTGATCCCCATTAA 1167 0.383 MFTFEFEQQETSKKRIMDVTFNDKSILTEPFTTQHLKLVTIVQNITQADHLRIVIKPTPEFDLPAMINAFEVYRVLNLPDSGTYQEDADALWSIKHIYEIPIMNWQGDPCIPNHFAWEGLTYTSDGNPRVISLNLSSRGLTGLIDVSFSRFTKLQSLDLSCNKLNGEVPEFFAQLSNLKFLESAHRFSTQITVAKVKYHSFIEIGKKSRSLSGWIMQDKEVSCSTHCIQHFAVLVMIVLIFLMIRRIKIEKRRMVEKLLSSYFLRHQGKEIGSFTQRQTLQNFQHFPYMHQVKFKLRGNLQGLLSERNPNVLNWSERLQIAADVGLDYLHNGIRPPVVHRDLKTTNILLNEKMQVKISDFGLCRSFANENDNHIPTVLAGTFGYLDPH 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0805 388 Pfam Leucine rich repeat 131 181 IPR001611 GO:0005515
Prci13g0805 388 ProSiteProfiles Protein kinase domain profile. 201 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0805 388 SUPERFAMILY Protein kinase-like (PK-like) 292 387 IPR011009 -
Prci13g0805 388 Pfam Malectin-like domain 5 75 IPR024788 -
Prci13g0805 388 PANTHER OS07G0107800 PROTEIN-RELATED 5 387 - -
Prci13g0805 388 Gene3D Ribonuclease Inhibitor 88 204 IPR032675 -
Prci13g0805 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Prci13g0805 388 Gene3D Transferase(Phosphotransferase) domain 1 296 388 - -
Prci13g0805 388 Pfam Protein kinase domain 325 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0805 388 SUPERFAMILY L domain-like 85 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0805 Prci-Chr13 6713714 6719520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0805 5 388 Receptor kinase-like Gene Family AT2G19230 32.898 2.05e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0805 Pkinase 1.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0805 - - pcin:129291624 764.992