Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0803 ATGTTTACCTTTGAATTTGAGCAGCAAGAAACATCTAAGAAAAGGATCATGGATGTTACTTTCAATGATAAGAGCATCCTCACAGAGCCCTTTACTACTCAACATCTGAAGCTAGTCACAATCGTTCAGAATATCACACAAGCAGACCATCTTCGTATTGTGATCAAACCCACACCAGAATTTGATTTACCAGCCATGATTAATGCATTTGAGGTTTATAGAGTACTAAATCTACCTGATTCAGGAACTTATCAAGAAGATGCTGATGCTCTTTGGAGTATTAAACATATTTATGAGATCCCCATCATGAATTGGCAAGGAGACCCTTGCATTCCAAATCATTTTGCTTGGGAAGGGCTCACTTACACCTCTGATGGCAATCCAAGGGTCATTTCACTGAACTTGAGTTCAAGGGGACTAACAGGGCTGATAGATGTTTCATTTTCAAGATTCACTAAACTACAATCCTTGGATTTGTCATGTAACAAACTGAACGGAGAAGTGCCAGAATTTTTTGCACAGTTATCAAATCTGAAATTCCTGGAATCAGCTCACAGGTTCAGTACACAAATCACTGTTGCTAAAGTCAAATACCACTCTTTCATTGAGATTGGAAAGAAATCCAGGTCTTTGTCTGGCTGGATCATGCAAGACAAAGAAGTTTCTTGCTCTACTCATTGCATCCAGCATTTCGCAGTTCTAGTAATGATTGTCCTTATTTTCTTGATGATCCGGAGAATCAAGATAGAAAAAAGGAGGATGGTAGAGAAGTTGCTGTCAAGCTACTTTCTCAGACATCAAGGCAAGGAGATAGGGAGTTTCACTCAGAGACAAACACTTCAAAATTTTCAACATTTTCCTTATATGCATCAAGTTAAGTTCAAATTGCGGGTAAGTTTGTTAACTATCGTTTACCATAAAAACCTGGTTTCTTTTGTTGGCTACTGTGACGAAGGTGATGTGAAAGCATTGATCTATGAATATATGGCTCAGGGTAATCTGCAAGGGCTATTGTCAGAGAGAAACCCAAATGTTTTGAATTGGTCTGAAAGACTTCAAATTGCTGCGGATGTTGGATTGGATTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACTACCAATATTTTACTGAATGAAAAGATGCAAGTTTTGAAGCACTCGAAAGTTGAACAAAAAGAGTGA 1200 0.3817 MFTFEFEQQETSKKRIMDVTFNDKSILTEPFTTQHLKLVTIVQNITQADHLRIVIKPTPEFDLPAMINAFEVYRVLNLPDSGTYQEDADALWSIKHIYEIPIMNWQGDPCIPNHFAWEGLTYTSDGNPRVISLNLSSRGLTGLIDVSFSRFTKLQSLDLSCNKLNGEVPEFFAQLSNLKFLESAHRFSTQITVAKVKYHSFIEIGKKSRSLSGWIMQDKEVSCSTHCIQHFAVLVMIVLIFLMIRRIKIEKRRMVEKLLSSYFLRHQGKEIGSFTQRQTLQNFQHFPYMHQVKFKLRVSLLTIVYHKNLVSFVGYCDEGDVKALIYEYMAQGNLQGLLSERNPNVLNWSERLQIAADVGLDYLHNGIRPPVVHRDLKTTNILLNEKMQVLKHSKVEQKE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0803 399 ProSiteProfiles Protein kinase domain profile. 201 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0803 399 Pfam Leucine rich repeat 131 181 IPR001611 GO:0005515
Prci13g0803 399 Pfam Malectin-like domain 5 75 IPR024788 -
Prci13g0803 399 Gene3D Phosphorylase Kinase; domain 1 275 329 - -
Prci13g0803 399 SUPERFAMILY L domain-like 85 181 - -
Prci13g0803 399 SUPERFAMILY Protein kinase-like (PK-like) 294 389 IPR011009 -
Prci13g0803 399 Gene3D Ribonuclease Inhibitor 87 199 IPR032675 -
Prci13g0803 399 PANTHER OS07G0107800 PROTEIN-RELATED 5 388 - -
Prci13g0803 399 Pfam Protein tyrosine and serine/threonine kinase 291 389 IPR001245 GO:0004672|GO:0006468
Prci13g0803 399 Gene3D Transferase(Phosphotransferase) domain 1 330 392 - -
Prci13g0803 399 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0803 Prci-Chr13 6713714 6719520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0803 5 389 Receptor kinase-like Gene Family AT1G51890 32.653 3.03e-63 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0803 PK_Tyr_Ser-Thr 5.7e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0803 - - pcin:129291624 779.63