Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0802 ATGTTTACCTTTGAATTTGAGCAGCAAGAAACATCTAAGAAAAGGATCATGGATGTTACTTTCAATGATAAGAGCATCCTCACAGAGCCCTTTACTACTCAACATCTGAAGCTAGTCACAATCGTTCAGAATATCACACAAGCAGACCATCTTCGTATTGTGATCAAACCCACACCAGAATTTGATTTACCAGCCATGATTAATGCATTTGAGGTTTATAGAGTACTAAATCTACCTGATTCAGGAACTTATCAAGAAGATGCTGATGCTCTTTGGAGTATTAAACATATTTATGAGATCCCCATCATGAATTGGCAAGGAGACCCTTGCATTCCAAATCATTTTGCTTGGGAAGGGCTCACTTACACCTCTGATGGCAATCCAAGGGTCATTTCACTGAACTTGAGTTCAAGGGGACTAACAGGGCTGATAGATGTTTCATTTTCAAGATTCACTAAACTACAATCCTTGGATTTGTCATGTAACAAACTGAACGGAGAAGTGCCAGAATTTTTTGCACAGTTATCAAATCTGAAATTCCTGGAATCAGCTCACAGGTTCAGTACACAAATCACTGTTGCTAAAGTCAAATACCACTCTTTCATTGAGATTGGAAAGAAATCCAGGTCTTTGTCTGGCTGGATCATGCAAGACAAAGAAGTTTCTTGCTCTACTCATTGCATCCAGCATTTCGCAGTTCTAGTAATGATTGTCCTTATTTTCTTGATGATCCGGAGAATCAAGATAGAAAAAAGGAGGATGGTAGAGAAGTTGCTGTCAAGCTACTTTCTCAGACATCAAGGCAAGGAGATAGGGAGTTTCACTCAGAGACAAACACTTCAAAATTTTCAACATTTTCCTTATATGCATCAAGTTAAGTTCAAATTGCGGGTAAGTTTGTTAACTATCGTTTACCATAAAAACCTGGTTTCTTTTGTTGGCTACTGTGACGAAGGTGATGTGAAAGCATTGATCTATGAATATATGGCTCAGGGTAATCTGCAAGGGCTATTGTCAGAGAGAAACCCAAATGTTTTGAATTGGTCTGAAAGACTTCAAATTGCTGCGGATGTTGGATTGGATTATTTGCATAATGGTATTAGGCCACCTGTAGTTCATAGAGACTTGAAGACTACCAATATTTTACTGAATGAAAAGATGCAAGTTAAGATTTCTGACTTTGGCCTTTGTAGATCTTTTGCAAATGAAAATGACAATCATATACCAACTGTACTAGCTGGCACGTTCGGTTATCTTGATCCCCATTAA 1269 0.3814 MFTFEFEQQETSKKRIMDVTFNDKSILTEPFTTQHLKLVTIVQNITQADHLRIVIKPTPEFDLPAMINAFEVYRVLNLPDSGTYQEDADALWSIKHIYEIPIMNWQGDPCIPNHFAWEGLTYTSDGNPRVISLNLSSRGLTGLIDVSFSRFTKLQSLDLSCNKLNGEVPEFFAQLSNLKFLESAHRFSTQITVAKVKYHSFIEIGKKSRSLSGWIMQDKEVSCSTHCIQHFAVLVMIVLIFLMIRRIKIEKRRMVEKLLSSYFLRHQGKEIGSFTQRQTLQNFQHFPYMHQVKFKLRVSLLTIVYHKNLVSFVGYCDEGDVKALIYEYMAQGNLQGLLSERNPNVLNWSERLQIAADVGLDYLHNGIRPPVVHRDLKTTNILLNEKMQVKISDFGLCRSFANENDNHIPTVLAGTFGYLDPH 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0802 422 SMART tyrkin_6 292 416 IPR020635 GO:0004713|GO:0006468
Prci13g0802 422 Gene3D Transferase(Phosphotransferase) domain 1 330 422 - -
Prci13g0802 422 SUPERFAMILY Protein kinase-like (PK-like) 294 421 IPR011009 -
Prci13g0802 422 Gene3D Ribonuclease Inhibitor 87 205 IPR032675 -
Prci13g0802 422 Pfam Malectin-like domain 5 75 IPR024788 -
Prci13g0802 422 SUPERFAMILY L domain-like 85 181 - -
Prci13g0802 422 Gene3D Phosphorylase Kinase; domain 1 275 329 - -
Prci13g0802 422 Pfam Leucine rich repeat 131 181 IPR001611 GO:0005515
Prci13g0802 422 PANTHER OS07G0107800 PROTEIN-RELATED 5 421 - -
Prci13g0802 422 Pfam Protein tyrosine and serine/threonine kinase 291 405 IPR001245 GO:0004672|GO:0006468
Prci13g0802 422 ProSiteProfiles Protein kinase domain profile. 201 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0802 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0802 Prci-Chr13 6713714 6719520 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0802 5 422 Receptor kinase-like Gene Family AT1G51890 34.388 2.42e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0802 PK_Tyr_Ser-Thr 3.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0802 - - pcin:129291624 850.121