Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0801 ATGATTGTCCTTATTTGTCTCATGATGAAGAGAATCAAAAGGAAGAAACAAAGAGCATTCAAGAAAGATGGGCAGGAGAAATCAAAGAAACAATTGTTTTCTCTCAGAGAGGTTACTAGAATTACTAGTAACTTCAAAACTGTGATTGGAAAAGGAGGATTTGGAGAAGTTTACTTTGGCACTCTGCAAGATGGTAGAGAAGTTGCAGTGAAGTTGCTTTCTCAGACATCGAGGCAAGGATATAGAGAATTTCACTCAGAGGCAGATTTGTTGACTGTTGTTCACCATAAAAACTTGGTCTCTTTTGTGGGGTACTGTGAAGAAGGTGATGTGAAAGCACTGATTTATGAATATATGGCTAAGGGGAATCTGCAACAGCTATTGTCAGATAAAAATCCAAATGCTTTGAAGTGGTTTGAGAGACTTCAAATTGCAGTGGATGTTGGACTTGGTTTGGACTATTTGCATTATGGCATTAAGCCTCCCATAGTTCATAGAGACTTGAAGACCTCCAACATTTTGTTGAATGAAAACATGCAAGCTAAAATTTCAGACTTCGGACTGTGCAGATCTTTTGCTAATGAACACGACAGTCATATATCAACTATACCAGCTGGCACACTTGGTTACCTTGATCCTGAGTTTCGTGGCTCCGGAAAGTTGAATAGAAGGAGTGATGTTTACAGCTTTGGGATCATTCTGCTTGAGCTAATCACTGGGCAGCCTGCAATGAGAGAGGAGTCACTTGGAGTCAAGATACCATTAGTCGACTGGGTTAACCCAAAAATTAACAATGGAGATATTGAATCCATCCTTGATCCAAGGTTACAAGGACAGTACAATAGAAGTACAGCATGGAAACTCGTGGAAATTGCCATGTTCTGCACTCAACCTATTGCAATCCAAAGGCCTGACATTAGTGAAGTGTTAACTGAGCTAAAGGACTGTTTATCTTTGGAAATAACCCATGAAAGATCAGAGAGCAGCATGAGAAGGTCCAGCCATAATTCACTGGATACAAGTTCTTTGAATCCTTTTCAGATTGATTCATCATCAGGCCCGCATGCTAGATAG 1074 0.4004 MIVLICLMMKRIKRKKQRAFKKDGQEKSKKQLFSLREVTRITSNFKTVIGKGGFGEVYFGTLQDGREVAVKLLSQTSRQGYREFHSEADLLTVVHHKNLVSFVGYCEEGDVKALIYEYMAKGNLQQLLSDKNPNALKWFERLQIAVDVGLGLDYLHYGIKPPIVHRDLKTSNILLNENMQAKISDFGLCRSFANEHDSHISTIPAGTLGYLDPEFRGSGKLNRRSDVYSFGIILLELITGQPAMREESLGVKIPLVDWVNPKINNGDIESILDPRLQGQYNRSTAWKLVEIAMFCTQPIAIQRPDISEVLTELKDCLSLEITHERSESSMRRSSHNSLDTSSLNPFQIDSSSGPHAR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0801 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Prci13g0801 357 Gene3D Phosphorylase Kinase; domain 1 24 118 - -
Prci13g0801 357 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Prci13g0801 357 SUPERFAMILY Protein kinase-like (PK-like) 29 313 IPR011009 -
Prci13g0801 357 Gene3D Transferase(Phosphotransferase) domain 1 119 340 - -
Prci13g0801 357 ProSiteProfiles Protein kinase domain profile. 43 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0801 357 SMART serkin_6 43 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0801 357 MobiDBLite consensus disorder prediction 333 357 - -
Prci13g0801 357 MobiDBLite consensus disorder prediction 324 357 - -
Prci13g0801 357 Pfam Protein tyrosine and serine/threonine kinase 45 313 IPR001245 GO:0004672|GO:0006468
Prci13g0801 357 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 119 326 - -
Prci13g0801 357 PANTHER OS07G0107800 PROTEIN-RELATED 3 324 - -
Prci13g0801 357 CDD STKc_IRAK 49 314 - -
Prci13g0801 357 FunFam Leucine-rich repeat receptor-like protein kinase 19 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0801 Prci-Chr13 6693995 6698224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0801 28 357 Receptor kinase-like Gene Family AT2G28970 49.849 8.19e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0801 PK_Tyr_Ser-Thr 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0801 - - qsa:O6P43_018241 424.091