Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0798 ATGAGGAATATCAGACACGGTTATAACATCATGAGAATCAGTTGGCAAGGAGATCCCTGCATGCCAGAGGATTATAGATGGGAAGGTGTAACTTGCAATAATTACTCTGGTAGCATTCCAAGGATCATTTCATTGAACTTGAGCTCAAGCAGAGTAGATGGAGAGATTATGGGTACTATTTTCTCCAAACTCGACATGTTGGAGTCATTGGACTTGTCAAACAACCAACTGACTGGAGAAATACCAGAATCTTTAGCAAAAGTAGCCAATTTGAAAGTGCTTAATTTGACAGGAAATGATCTCATAGGTTTAGTTCCTGAGTCTCTGGAGGAGAAATCCGGCTTGACATTGAGTTTGGATGGAAATCCAGGTCTCTGTCAAACAGCTAGCTCTTGCAAAACCAAAACGCTCATTGGACCACTTGTTGCCTCAGCAATAGCTTCTGCGGCAGTTCTTCTGATAGCAATTTTTATTCCTATCATGCTCTGCAAACGGAAAGGAAAACCACAAAATGCGATGTTGCCTAAGAAGGGTGGTGATTTTAGATCAAAATGTCAAGCATTTAGTCTGGAAGAAGTTGTTAGTATGACCAATAACTTTGAATCAGTAATTGGTGAAGGCGGATTTGGAAAAGTGTACCTTGGAAAATTACAACATGGTATCCAAGTTGCAGTCAAATTACTGTCCAAGTCATCACACCAACGATTTACCGAGTTTGAATCAGAGGCAAAGCTATTATCATTGGTTTATCATAAAAACTTAGTTTCTCTTATCGGTTACTGTGACGATGGTGACATGAAAGCATTGATTTATGAATATATGGCAAAGGGAAATCTCCTACACCTATTGACAGGTAAGAGCCCTTATGTTATAAAGTGGAAAGAGAGACTTCAAATTGCATTCGATGCAGCATGTGGATTGAACTATCTACATAATGGTTGCAACCCACCAATAGTTCATCGAGACCTAAAATCATCTAACATCTTATTGAGTGAAAACATGCATGCCAAGATTGCTGATTTTGGACTCTGTAAGGTTTTTGCTAGTGATACTGATACCCATATTTCAACTCGTCCTGCTGGCACATTTGGCTATCTTGACCCTGAATTTTACAGATGTGGGAACTTGCACAAGAATAGTGATGTTTATAGTTTTGGGATAATTCTACTTGAGTTGATGACCGGACGACCAGCTATCATCAAAACATCTGAAGGTATAAATCACATAGTTGATTGGGTGACTCCAAAGTTTAAAGTGGGAGATATGGAATCCATTATGGATCCGAAATTAGAGGGAAAATTCAATATTGCTTCAGCAAGAAAGGTTATAGAGATAGCCATGTGTTGCATTGAAACAAGTGCAGTGAAAAGACCTGATATCAGTAATGTAGAGAATGATCTGAAGCAGTGTCTGGCTCTGGAAACGAACAATGAAAGTGAAGAAAGCAGCAGTTTATTCTCAAGCAGCACATTTGATACAAGTTTTTATCAGTGTGGATCACACTCACCACCATCTGTTAGGTAA 1524 0.3904 MRNIRHGYNIMRISWQGDPCMPEDYRWEGVTCNNYSGSIPRIISLNLSSSRVDGEIMGTIFSKLDMLESLDLSNNQLTGEIPESLAKVANLKVLNLTGNDLIGLVPESLEEKSGLTLSLDGNPGLCQTASSCKTKTLIGPLVASAIASAAVLLIAIFIPIMLCKRKGKPQNAMLPKKGGDFRSKCQAFSLEEVVSMTNNFESVIGEGGFGKVYLGKLQHGIQVAVKLLSKSSHQRFTEFESEAKLLSLVYHKNLVSLIGYCDDGDMKALIYEYMAKGNLLHLLTGKSPYVIKWKERLQIAFDAACGLNYLHNGCNPPIVHRDLKSSNILLSENMHAKIADFGLCKVFASDTDTHISTRPAGTFGYLDPEFYRCGNLHKNSDVYSFGIILLELMTGRPAIIKTSEGINHIVDWVTPKFKVGDMESIMDPKLEGKFNIASARKVIEIAMCCIETSAVKRPDISNVENDLKQCLALETNNESEESSSLFSSSTFDTSFYQCGSHSPPSVR 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0798 507 PANTHER OS07G0107800 PROTEIN-RELATED 1 477 - -
Prci13g0798 507 SMART serkin_6 198 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0798 507 Gene3D Phosphorylase Kinase; domain 1 176 273 - -
Prci13g0798 507 Gene3D Ribonuclease Inhibitor 3 128 IPR032675 -
Prci13g0798 507 ProSiteProfiles Protein kinase domain profile. 198 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0798 507 ProSitePatterns Protein kinases ATP-binding region signature. 204 226 IPR017441 GO:0005524
Prci13g0798 507 PRINTS Leucine-rich repeat signature 88 101 - -
Prci13g0798 507 PRINTS Leucine-rich repeat signature 67 80 - -
Prci13g0798 507 Pfam Leucine rich repeat 44 101 IPR001611 GO:0005515
Prci13g0798 507 Gene3D Transferase(Phosphotransferase) domain 1 274 493 - -
Prci13g0798 507 FunFam receptor-like protein kinase FERONIA 165 273 - -
Prci13g0798 507 CDD STKc_IRAK 204 469 - -
Prci13g0798 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Prci13g0798 507 Pfam Protein tyrosine and serine/threonine kinase 200 467 IPR001245 GO:0004672|GO:0006468
Prci13g0798 507 SUPERFAMILY L domain-like 24 116 - -
Prci13g0798 507 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 274 482 - -
Prci13g0798 507 FunFam Leucine-rich repeat receptor-like kinase 1 128 - -
Prci13g0798 507 SUPERFAMILY Protein kinase-like (PK-like) 184 467 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0798 Prci-Chr13 6675902 6679621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0798 1 494 Receptor kinase-like Gene Family AT2G28970 46.498 2.31e-148 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0798 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0798 - - pcin:129290778 988.793