Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0797 ATGACCGAACGTTTCGATTTCGTCAGGTCTTGGTTCCAGGGTGACAAAGACACCAAAAACTCACGGCCAATCAGCACATCAATAGCGATTGACGATGATTCCAAAGAGTACAAACTACCAAAGGAAGTGTTGAGCACCGCAATCACGCCACTGAATAGTTCGTTTCCATTAGTTGTCAACGTGAATGCTAGCACAAATCATGAGTATTATGTTTATCTTCATTTCTTTGAATTTGAGAAGCATTCTCAGAATCAGCAGAGAAGTATGGACATTGCCTTCACTGATTCAATCCGAGACAACAACGTCACTCTTGAATACTTGCAACTCCAAACCATCGTTCATCGGATTCCAAAAGAACTCTCTCTTACTAATATTTCCATCACTTCCTCCCCAGGTTCTACTCTGCCCCCCATCGTCAACGGTCTTGAGATCTACAGGGTACGACACAAACAAAATTCACCAACACGTGAAGGAGATGGCAAGTTTGATGCGATGAGGAATATCAGACACGGTTATAACATCATGAGAATCAGTTGGCAAGGAGATCCCTGCATGCCAGAGGATTATAGATGGGAAGGTGTAACTTGCAATAATTACTCTGGTAGCATTCCAAGGATCATTTCATTGAACTTGAGCTCAAGCAGAGTAGATGGAGAGATTATGGGTACTATTTTCTCCAAACTCGACATGTTGGAGTCATTGGACTTGTCAAACAACCAACTGACTGGAGAAATACCAGAATCTTTAGCAAAAGTAGCCAATTTGAAAGTGCTTAATTTGACAGGAAATGATCTCATAGGTTTAGTTCCTGAGTCTCTGGAGGAGAAATCCGGCTTGACATTGAGTTTGGATGGAAATCCAGGTCTCTGTCAAACAGCTAGCTCTTGCAAAACCAAAACGCTCATTGGACCACTTGTTGCCTCAGCAATAGCTTCTGCGGCAGTTCTTCTGATAGCAATTTTTATTCCTATCATGCTCTGCAAACGGAAAGGAAAACCACAAAATGCGATGTTGCCTAAGAAGGGTGGTGATTTTAGATCAAAATGTCAAGCATTTAGTCTGGAAGAAGTTGTTAGTATGACCAATAACTTTGAATCAGTAATTGGTGAAGGCGGATTTGGAAAAGTGTACCTTGGAAAATTACAACATGGTATCCAAGTTGCAGTCAAATTACTGTCCAAGTCATCACACCAACGATTTACCGAGTTTGAATCAGAGGCAAAGCTATTATCATTGGTTTATCATAAAAACTTAGTTTCTCTTATCGGTTACTGTGACGATGGTGACATGAAAGCATTGATTTATGAATATATGGCAAAGGGAAATCTCCTACACCTATTGACAGGTAAGAGCCCTTATGTTATAAAGTGGAAAGAGAGACTTCAAATTGCATTCGATGCAGCATGTGATTTTACAGATGTGGGAACTTGCACAAGAATAGTGATGTTTATAGTTTTGGGATAA 1464 0.4044 MTERFDFVRSWFQGDKDTKNSRPISTSIAIDDDSKEYKLPKEVLSTAITPLNSSFPLVVNVNASTNHEYYVYLHFFEFEKHSQNQQRSMDIAFTDSIRDNNVTLEYLQLQTIVHRIPKELSLTNISITSSPGSTLPPIVNGLEIYRVRHKQNSPTREGDGKFDAMRNIRHGYNIMRISWQGDPCMPEDYRWEGVTCNNYSGSIPRIISLNLSSSRVDGEIMGTIFSKLDMLESLDLSNNQLTGEIPESLAKVANLKVLNLTGNDLIGLVPESLEEKSGLTLSLDGNPGLCQTASSCKTKTLIGPLVASAIASAAVLLIAIFIPIMLCKRKGKPQNAMLPKKGGDFRSKCQAFSLEEVVSMTNNFESVIGEGGFGKVYLGKLQHGIQVAVKLLSKSSHQRFTEFESEAKLLSLVYHKNLVSLIGYCDDGDMKALIYEYMAKGNLLHLLTGKSPYVIKWKERLQIAFDAACDFTDVGTCTRIVMFIVLG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0797 487 Gene3D Ribonuclease Inhibitor 164 292 IPR032675 -
Prci13g0797 487 Pfam Protein tyrosine and serine/threonine kinase 364 469 IPR001245 GO:0004672|GO:0006468
Prci13g0797 487 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Prci13g0797 487 Pfam Leucine rich repeat 208 265 IPR001611 GO:0005515
Prci13g0797 487 Gene3D Transferase(Phosphotransferase) domain 1 344 470 - -
Prci13g0797 487 FunFam receptor-like protein kinase FERONIA 329 437 - -
Prci13g0797 487 FunFam Leucine-rich repeat receptor-like kinase 161 292 - -
Prci13g0797 487 PRINTS Leucine-rich repeat signature 252 265 - -
Prci13g0797 487 PRINTS Leucine-rich repeat signature 231 244 - -
Prci13g0797 487 SMART tyrkin_6 362 484 IPR020635 GO:0004713|GO:0006468
Prci13g0797 487 SUPERFAMILY Protein kinase-like (PK-like) 348 468 IPR011009 -
Prci13g0797 487 ProSiteProfiles Protein kinase domain profile. 362 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0797 487 PANTHER OS07G0107800 PROTEIN-RELATED 9 468 - -
Prci13g0797 487 Pfam Malectin-like domain 8 147 IPR024788 -
Prci13g0797 487 SUPERFAMILY L domain-like 187 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0797 Prci-Chr13 6674432 6679249 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0797 22 468 Receptor kinase-like Gene Family AT1G05700 41.141 1.29e-101 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0797 Malectin_like 3.8e-25 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0797 - - pcin:129290778 927.932