Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0792 ATGCTAGTTACTAATGTGCATATCATATTTCAATCATACGACTTGACTGTTGTATTTTTTCCTAGTTTGGATGGAAATCCAGGTCTCTGTCAAATAGGTGTTTGCAGAGCCAAAACACAGAAGTCCATTATACCAATTATTGCATCCGTGGCAGCTTCTGTAGCAGTTCTTGTAATACTAGCCTGTATTGCTGTGATGTTCTGCAAGCATAAAATGAAAAAACAAAGTGACATGGAAGGTCACCCAGTGAAGTTTTCTCCATTCAAGAAGGACGGGGAACTGAAATCGAAAAATCTTACATTTAATCACCTTGAAGTTCTGAGTATTACCAATCACTTTGAAACCGTAATTGGAGAAGGGGGATTTGGAAAAGTGTATCTTGGCACCCTTCAAGATGATACGCAAGTTGCAATCAAGTTACTGTCGAAGTCATCACAACAAGGGTTTAAGGAATTTCAGTCAGAGGTGGAACTTTTGATGGTTGTTCATCATAGGAACTTGGTTTCTCTTGTTGGCTATTGTAACGATGGTGACATGAAAGCACTAGTTTATGAATACATGCCTGAAGGAAATCTCCGACAGAAATTATCAGATAAGAACCAGCGTGTTTTGAAATGGAATGATAGACTTCAAATAGCATTGGATGCAGCATATGGGTTGGACTATCTACATAATGGTTATAAGCCAGCAATAATCCACAGAGACCTGAAAACTTCTAACATCTTGCTAAGCAAAAACATGCAAGCCAAGATTGCTGACTTTGGATTGTTCAGAGCTTTTCTCGACGACACCGATACTAAAGTCTCAACTTGTCCTGCTGGCACACTTGGTTATCTTGATCCTGAATTCCATAACTCTGGAAACCTAAATAAGAAAAGTGATATTTATAGTTTTGGGATAATTTTACTTGAGCTTATAACTGGTCGGCCAGCAATAATAGGAACAAGCGGCAATACAAATCACATATCTAATTGGGTCAGTCCAAGGCTGGAGAGTGGGGATATCCAATCCATTGTGGATCCAAGATTAGAGGGAAAATTCAATGCTGCTTCAGCATGGAAATTTTTAGAGATAGGCATGTCTTACATTCCACCAATTTCAATTCAAAGGCCTGAGATGGGTCATGTAGTAGCTGATTTGAAGGAATGTCTAGCCTTGGAAACATCCCTTGAAAGTGCAGAGGGTGACAGTGGAATTTCTGGCTCTGCATCAAGGATCGGTTATTTTCCACTTGAATCAAACTCAGCTTCATGTGCCAGGTGGGACTATTTGCAAAGGCAGGCAGTCTCTCCGAACCAATCATCCTATCCAACTAGAAAGATTTGTTTTGTCTTGTCAAGTAATCCTGTTTCTCGTCTATATTTATAA 1368 0.3947 MLVTNVHIIFQSYDLTVVFFPSLDGNPGLCQIGVCRAKTQKSIIPIIASVAASVAVLVILACIAVMFCKHKMKKQSDMEGHPVKFSPFKKDGELKSKNLTFNHLEVLSITNHFETVIGEGGFGKVYLGTLQDDTQVAIKLLSKSSQQGFKEFQSEVELLMVVHHRNLVSLVGYCNDGDMKALVYEYMPEGNLRQKLSDKNQRVLKWNDRLQIALDAAYGLDYLHNGYKPAIIHRDLKTSNILLSKNMQAKIADFGLFRAFLDDTDTKVSTCPAGTLGYLDPEFHNSGNLNKKSDIYSFGIILLELITGRPAIIGTSGNTNHISNWVSPRLESGDIQSIVDPRLEGKFNAASAWKFLEIGMSYIPPISIQRPEMGHVVADLKECLALETSLESAEGDSGISGSASRIGYFPLESNSASCARWDYLQRQAVSPNQSSYPTRKICFVLSSNPVSRLYL 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0792 455 Pfam Protein tyrosine and serine/threonine kinase 113 309 IPR001245 GO:0004672|GO:0006468
Prci13g0792 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Prci13g0792 455 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 187 394 - -
Prci13g0792 455 Gene3D Transferase(Phosphotransferase) domain 1 188 398 - -
Prci13g0792 455 SUPERFAMILY Protein kinase-like (PK-like) 98 379 IPR011009 -
Prci13g0792 455 Gene3D Phosphorylase Kinase; domain 1 117 187 - -
Prci13g0792 455 PANTHER OS07G0107800 PROTEIN-RELATED 24 389 - -
Prci13g0792 455 SMART serkin_6 111 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0792 455 ProSiteProfiles Protein kinase domain profile. 111 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0792 455 FunFam Leucine-rich repeat receptor-like protein kinase 89 186 - -
Prci13g0792 455 ProSitePatterns Protein kinases ATP-binding region signature. 117 139 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0792 Prci-Chr13 6569980 6572627 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0792 23 397 Receptor kinase-like Gene Family AT2G28970 49.482 5.44e-115 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0792 PK_Tyr_Ser-Thr 6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0792 - - pcin:129289827 885.56