Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0779 ATGCAGGGCACACCACTGTGGATTCTGGCCTTGGTTGTGTTTGTTTCAGTCATCATTACTAGCAACTCAGCACAAGTTGTTGCATATGGTGCAAATTCAGGGGCGATAAGCATCGACTGTGGGTTACAGCAGGAGAGTCGGGACGAGGTCAATGATTTTTATTATGAGGCAGATGGTTCACAGTTTGCAGAATCTGGCGAAATACATAATGTATCTTCTGAGTACATCTTGACAAGTAAAGACGAGCAGATTGGGCAGCAACTGAACACCTTGAGAAGCTTTCCAAAAGGGCAAAGGAACTGCTATACACTCAAACCCAAACAAGGCAAAAATAACAAATATCTCATCAGGGCTTTCTTCAAATATGGAAACTATGACAACAAAAATTCAACTCCAGAGTTTGATTTGCATCTTGGCGTCAATTACTGGACAACAATTTCATTGCAAAGATCCGATTATATTACACGATCCGAGGTCATTCATGTTGCCCCGACTGACAACATTGATGTGTGTCTGGTAAACACAGGCGGGGGGGCGCCGTTCATTTCCTTGTTAGAGCTATGGCCTTTGTTGAATTCTCTATATCAGCCCATGTCCAGTTCACTCCCGCTCGAACTCATCTCACGTCCTAACCTGGGCATGACTGAAGATTTTGTTTTCATCAGATATATTGACGATGTTTATGGTAGGTCCTGGTTCAATAAAACGATCGACAACTCAATGCCGATCATGACATCAGATGCGATTGAAAGTGATTCAACAGCCTACAAACTACCATATGAAGTGTTGAGAACTGCGATCCAATCACCGAATGATAACTTATTGATCAACTGGGATTACCTTGAGGGTTATGAGTATTATGTTTACCTTCACTTTTTCGACTTTGTTGCGCATGAGAATCAACAAAGAAGCATGGAAATTGCTTTCACTGATACGATCCGAGAGAACGGAGTTTCTCCCGATAATATTTTAATCACGTCCTTGCCAAGTTCTCGTTTACCTCCCATGATCAATGCTTATGAGGTTTATAAAGTACTGCCCCAGCCTAATTCATCAACTAATGAAGGAGATGGCAAATTTAACTACTATGATTGCATACTAAACCCTGAAACGCTACCTCTGCTTGAAATGACAGTCAAGGCTATGCAAAACATCAAGCATGCTTATGACATCAAAAGAATCGACTGGCAAGGAGATCCCTGCATGCCAATAGATTATAGATGGGAAGGTCTGACTTGCAACTCTGACAGCATTCCAAGGGTCACTTCATTGAATTTGAGCTCAGGCAATCTGATCGGAGAGATAAATACTTCATTCTCCAATCTCCAAAAGTTGGAGTCCTTGGACTTGTCTAACAACCTATTGATTGGAGAAATACCTTCATTTCTAGCAGAACTGCCAAATTTGAAATTACTTAATTTGACAGGAAATAACCTCACAGGTTCAATTCCCAAGGCTCTAAGGGAGAAGTCCGGTACCACTTTGACACTAAGTTTGGATGCAAATCCAGGTCTCTGGCTGGTAGACTCTTGCTTAAAGAAAACACAGAAGACCATTATAACACTGATTGCATCTGTAGTAGCTTCTGTAGTTGTTCTTGTGACAGCAGTCTGCATTCTTGTGATATTCTGCAAATACAAAAGGAAAAAACGAGGTGATATGGAAGGTCACCTAGTGAAGTATACTTCATCTGGGAAAGATGGGAAACTGAAATCAAAGAATCGAGCGTTTAATCACTCTGAAGTTGTTAGCATGACCAATGACTTTGAAATTGTGATTGGACAAGGGGGGTTTGGAAAAGTGTACCTTGGTAAACTTCAAGATGATACACAAGTTGCGGTAAAGATACTGTCCAAGTCATCACAACAAGGGTTTAAGGAATTCCAATCTGAGGCAGAACTTTTGATGATTGTTCATCACAGGAACTTGGTTTCTCTTACTGGCTATTGTGATGATGGTGACGTGAAAGCACTGGTTTATGAATATATGAATGGAGGAGATCTTCGACACAAATTATCAGATAAGAATGCGTATGTTTTGACATGGAATGAGAGACTTCATATTGCATTGGATGCCTCATATGGATTGGACTATCTACATAATGGTTGTAAGCCACCAATAATCCATAGAGACATTAAAACTTCCAATATTTTGCTAAGCAAAAACATGCAAGCCAAGATTGCTGATTTCGGACTGTCTAGGGCTTTCTTCAATGATTTTGACACTCATTTTTCAACTCGCCCTGCTGGCACATTAGGCTACCTTGATCCTGAATTCCATAGCTCTGGAAACTTGAATAAGAAAAGTGATGTTTATAGTTTTGGGATAATTTTACTTGAGCTGATGACCGGCCGACCAGCAATGATAGGAATGCCTGGCAACACAAGTCATGTAGCGGATTGGGTCACTCCAAAGCTAAGGAGTGGGGATATCCAATCCATTATGGATCCAAGACTAGAGGGAAAATTCAATACAGCTTCAGCATGGAGGTTTTTAGAGATGGCCATGTCTTGCGTTCTACCAACTGCAATCCAAAGGCCTGACATTAGTCTTGTAGTAGCTGAGTTAAGGGAATGCTTGGCTCTAGAAATATCCCTTGAAAATGCAGAAAGCAACTCTGGAATTTCTAGCTCTGCATTGAGCATCAGTTTTTCTCAGTCTGAATCAGATTTAGCTCCATATGCCAGGTAG 2691 0.4099 MQGTPLWILALVVFVSVIITSNSAQVVAYGANSGAISIDCGLQQESRDEVNDFYYEADGSQFAESGEIHNVSSEYILTSKDEQIGQQLNTLRSFPKGQRNCYTLKPKQGKNNKYLIRAFFKYGNYDNKNSTPEFDLHLGVNYWTTISLQRSDYITRSEVIHVAPTDNIDVCLVNTGGGAPFISLLELWPLLNSLYQPMSSSLPLELISRPNLGMTEDFVFIRYIDDVYGRSWFNKTIDNSMPIMTSDAIESDSTAYKLPYEVLRTAIQSPNDNLLINWDYLEGYEYYVYLHFFDFVAHENQQRSMEIAFTDTIRENGVSPDNILITSLPSSRLPPMINAYEVYKVLPQPNSSTNEGDGKFNYYDCILNPETLPLLEMTVKAMQNIKHAYDIKRIDWQGDPCMPIDYRWEGLTCNSDSIPRVTSLNLSSGNLIGEINTSFSNLQKLESLDLSNNLLIGEIPSFLAELPNLKLLNLTGNNLTGSIPKALREKSGTTLTLSLDANPGLWLVDSCLKKTQKTIITLIASVVASVVVLVTAVCILVIFCKYKRKKRGDMEGHLVKYTSSGKDGKLKSKNRAFNHSEVVSMTNDFEIVIGQGGFGKVYLGKLQDDTQVAVKILSKSSQQGFKEFQSEAELLMIVHHRNLVSLTGYCDDGDVKALVYEYMNGGDLRHKLSDKNAYVLTWNERLHIALDASYGLDYLHNGCKPPIIHRDIKTSNILLSKNMQAKIADFGLSRAFFNDFDTHFSTRPAGTLGYLDPEFHSSGNLNKKSDVYSFGIILLELMTGRPAMIGMPGNTSHVADWVTPKLRSGDIQSIMDPRLEGKFNTASAWRFLEMAMSCVLPTAIQRPDISLVVAELRECLALEISLENAESNSGISSSALSISFSQSESDLAPYAR 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0779 896 SMART serkin_6 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0779 896 FunFam Leucine-rich repeat receptor-like protein kinase 565 662 - -
Prci13g0779 896 Gene3D Ribonuclease Inhibitor 377 497 IPR032675 -
Prci13g0779 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 707 719 IPR008271 GO:0004672|GO:0006468
Prci13g0779 896 Pfam Malectin-like domain 38 325 IPR024788 -
Prci13g0779 896 ProSiteProfiles Leucine-rich repeat profile. 444 467 IPR001611 GO:0005515
Prci13g0779 896 PANTHER OS07G0107800 PROTEIN-RELATED 36 866 - -
Prci13g0779 896 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 663 869 - -
Prci13g0779 896 ProSitePatterns Protein kinases ATP-binding region signature. 593 615 IPR017441 GO:0005524
Prci13g0779 896 Pfam Protein tyrosine and serine/threonine kinase 592 791 IPR001245 GO:0004672|GO:0006468
Prci13g0779 896 CDD STKc_IRAK 593 856 - -
Prci13g0779 896 Pfam Leucine rich repeat 419 479 IPR001611 GO:0005515
Prci13g0779 896 Gene3D Transferase(Phosphotransferase) domain 1 664 876 - -
Prci13g0779 896 FunFam Leucine-rich repeat receptor-like kinase 377 506 - -
Prci13g0779 896 ProSiteProfiles Protein kinase domain profile. 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0779 896 Gene3D Phosphorylase Kinase; domain 1 593 663 - -
Prci13g0779 896 SUPERFAMILY Protein kinase-like (PK-like) 572 856 IPR011009 -
Prci13g0779 896 SUPERFAMILY L domain-like 404 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0779 Prci-Chr13 6393829 6400449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0779 6 896 Receptor kinase-like Gene Family AT2G19210 40.841 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0779 Malectin_like 9.2e-74 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0779 - - pcin:129289802 990.719