Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0776 ATGTTCAGATACGGAAACTATGACAACAAATATTCAGCTCCAGAGTTTGATTTGCATCTTGGCGTCACTTATTGGGTGCATATGGATTGGGATGGTTTCAGAAATTTTGTCGACAATGAGATCATTCATGTTGCTCCAGCTGACACCATTGACGTGTGCCTTGCAAACACTGGGCGGGGCATCCCACTCATCTCCTTGTCAGAGCTTTATCCTTTGCCTTATTCTCCATATCAGCCCACAACACCACTAGACTTCAGCGACCGCCTTAACTTCGGTATGAAAGCAACTTTCATCAGATACGCGAATGATCCCTACGGTAGATCTTGGTTCAATGATAGAGTCATCGACAACTCAAAGTCAATCAGCACACCAACAGCTATTGAGGATGATTCCAAAGAGTACAAACTACAAAAGCAAGTGTTGAGCACTGCAATCACATCACTGGATGCTTCCTCTCCCTTAGTTATTGACGTGTCCACTAGAAATGACTATGAGTATCTTGTTCATCTTCATTTTTTTGACTTCGAGAAGCATCCTCAGAATCAGCAAAGAAGCATGGAAATTAATTTCACTGATATCATCCGACAGTCCGTAACTCTTAACTACAAGCAACTCCACACCATAAAGGCGACAATTCCGGAAGGATCCTATTCAATTTCAATCACATCCTCCCCAGGTTCTGGTTTGCACCCCATGATCAATGTTTATGAGATCTACAGAGCACTACCACAGCCAAAGTCACCAACTTATGAACGAGATGTTGATGCTATGTGGAAGATCAAAGATGCCTATAACATTCTCAGAATCAGTTGGCAAGGAGATCCCTGCACGCCAGAGGAATATAGATGGGAAGGAGTAATTTGCAATTACTCTGAAAGCATCCCAAGGATCATCTCATTGGACACGAGCTCAAGCAAATTAGGAGGAGACATAGTTACTTATTTCTCCAGTCTCATGATGTTGGCTTCCTTAGATTTGTCAAACAACCAATTGACAGGAGAAATACCACAATTTTTGGCAAAACTTCCCAAATTGAAAGTACTTAATTTGACAGGGAATAATCTCAAAGGTTCAATTCCGAAGGCTCTGAGGGAGAAGTCGAGTACCGGTTTGACGTTGAGTTTGGATGGAAATCCAGGTCTATGTCAAACAGGTTCTAGCAAAACCACAACAAAGAAGTTCATTGTACCACTTGCTGCCTCAGTAGCGGCTTCTATGGCAACTCTTGTAATATTAATCTACATTTCTTTGGTACTCTACGAACGTAGAAGAAAAAAGCAAAAAGTGTTGTTGCTCAAGAAAGCTGGCGATCTTAAATCAAAAAATCAAGTATTTTGTCAGGATGAAATTCTTAGTATTACCAGTAACTTTGAATCAGTAATTGGAGAAGGGGGGTTTGGAAAAGTGTACCTTGGAAGGCTAAAGGACGGTACACAAGTTGCAGTCAAATTGCTTTCAAAGTCATCACAGCAAGGATTTAAAGAGTTCGAATCAGAGGCAAAACTATTGTCCATAGTTTTTCACAGGAACTTAGTTTCTCTTGTTGGATACTGCGATGATGGTGACATGAGGGCATTGATTTATGAATATATGGCAAAGGGAAATCTTCGGCACCAATTGTCAGGTTTGTTAAGTCCTGTTTTTCCAATATCTTTACAATTATCACATAAGGGAACGCTTTCGCGGCCAAATTTTTTTTTTTTTTGGGTAGATTTTCCTGATAATTCTGAAGGTTTTGAGAGTGTTTCAAAGAATGCCTGCAAGGATGCATTACAATTTTCTTGCACAACATGA 1794 0.4041 MFRYGNYDNKYSAPEFDLHLGVTYWVHMDWDGFRNFVDNEIIHVAPADTIDVCLANTGRGIPLISLSELYPLPYSPYQPTTPLDFSDRLNFGMKATFIRYANDPYGRSWFNDRVIDNSKSISTPTAIEDDSKEYKLQKQVLSTAITSLDASSPLVIDVSTRNDYEYLVHLHFFDFEKHPQNQQRSMEINFTDIIRQSVTLNYKQLHTIKATIPEGSYSISITSSPGSGLHPMINVYEIYRALPQPKSPTYERDVDAMWKIKDAYNILRISWQGDPCTPEEYRWEGVICNYSESIPRIISLDTSSSKLGGDIVTYFSSLMMLASLDLSNNQLTGEIPQFLAKLPKLKVLNLTGNNLKGSIPKALREKSSTGLTLSLDGNPGLCQTGSSKTTTKKFIVPLAASVAASMATLVILIYISLVLYERRRKKQKVLLLKKAGDLKSKNQVFCQDEILSITSNFESVIGEGGFGKVYLGRLKDGTQVAVKLLSKSSQQGFKEFESEAKLLSIVFHRNLVSLVGYCDDGDMRALIYEYMAKGNLRHQLSGLLSPVFPISLQLSHKGTLSRPNFFFFWVDFPDNSEGFESVSKNACKDALQFSCTT 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0776 597 Pfam Protein tyrosine and serine/threonine kinase 457 541 IPR001245 GO:0004672|GO:0006468
Prci13g0776 597 SUPERFAMILY Protein kinase-like (PK-like) 442 545 IPR011009 -
Prci13g0776 597 Pfam Leucine Rich repeats (2 copies) 323 357 IPR025875 -
Prci13g0776 597 SUPERFAMILY L domain-like 277 365 - -
Prci13g0776 597 PANTHER OS07G0107800 PROTEIN-RELATED 1 538 - -
Prci13g0776 597 ProSitePatterns Protein kinases ATP-binding region signature. 461 483 IPR017441 GO:0005524
Prci13g0776 597 Pfam Malectin-like domain 1 240 IPR024788 -
Prci13g0776 597 FunFam Leucine-rich repeat receptor-like kinase 252 384 - -
Prci13g0776 597 SMART tyrkin_6 455 591 IPR020635 GO:0004713|GO:0006468
Prci13g0776 597 ProSiteProfiles Protein kinase domain profile. 455 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0776 597 PRINTS Leucine-rich repeat signature 342 355 - -
Prci13g0776 597 PRINTS Leucine-rich repeat signature 321 334 - -
Prci13g0776 597 Gene3D Phosphorylase Kinase; domain 1 461 532 - -
Prci13g0776 597 Gene3D Ribonuclease Inhibitor 255 378 IPR032675 -
Prci13g0776 597 FunFam Leucine-rich repeat receptor-like protein kinase 433 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0776 Prci-Chr13 6345135 6351951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0776 1 542 Receptor kinase-like Gene Family AT1G07560 38.420 2.19e-112 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0776 Malectin_like 2.2e-46 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0776 - - pcin:129291513 1179.47