Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0771 ATGAAGATCAGGCCACTCTGGATTCTGGCTTTGGTGGTGCCTGCTTCATTGATCATCCATCTTCAAAAGTCAGCACAAGTTTTTGCCTCTGATGATGATCAAACTGATACAGGCCGGGAGATAAGCATTGATTGTGGGGTAACTGAAGAAAGTCAGGATTCAAATGGATTTCATCACGAGGCAGATGATGCAGAGTTTGTAGAATCTGGCAAAATATACAACGTGTCCTCTGATGACATCTATGCTAATAGCCAAGAACAGGTTTGGGAGCAAATGAAAACAGTGAGAAGTTTCCCGGAAGGGGTGAGAAACTGCTACACACTCAAACCCAAGAATGGCAAATGCAACAACTATCTCATTAGGGTTTACATGTCATATGGAAACTACGACCACAAAAACTCCATTCCATACTTTCATTTACATCTTGGCGTCAATTTTTGGGAAAAAATTAAGTTCCAGAATGTCACTGATATTCGACGAAAAACAGTCGTTCAACTCTCCCCAACAAACTACATTGATGTCTGTCTTATCAACGTTGGTAAAGGGACACCTTTTATATCGTTGTTGGAACTTTGGCCTTTGTCAAACTCTATATATCGAGCCTCCTCTAGTTTGCTCCCATTAGGCCTCATGACGTGTGTTAACCTGGGCATGTCCGAAAACCTTAAATTTATCAGATATGCAGCTGATATCTATGGTAGGTCCTGGTTAAATGGAAAGATCGACAACTCAAAGCCAATATACACATCTGAAGGAATTAACATTGACGTGAAAGAGTACAGGCTGCCAAGTGATGTGTTAAAAACTGCAGTCCGAGCACAGAATGTTTCGTCTTCCTTATATATCAACTTGACCTCCATTAATTTTACAGCAGATAACGAGCATTATATTTACCTTCATTTTTTTGATTTCGAGGAGCATTCTAATGGTGAGGTAAGAAGCATGGAAATCACTTTCACTGATACCATCCGAGAGCCTGTAACTCTTAAACACGAAGATGTCCGTACCTTGGTTAAGAAAATTCCAAAAGGGGTTATTCTTAATGGTATTTCAATCACTTCGACCCCAGGCTCTAGCTTACCCCCCATGATCAATGCCTATGAGATTTACAGAGCACTGCCCCAACCAAATACCCCAACCCATGAAGAAGATGTTGATGCTATGCGGAATATCAAACATGCTTATAACATCATGAGAATCAGCTGGCAAGGTGATCCCTGCATGCCGATAGATTATAGATGGGCAGGTGTGACTTGCAACTACTCAGAGAGAATTCCAAGGGTCACTTCTTTGAACATGAGCTCAAGCAAATTGGCGGGACAGATTGTTACTTCATTCTCTAATCTCATGACATTGGAGGCCTTGGATTTGTCGAACAACCAATTAACAGGGGAAATACCGGAATCTTTAGCAGAACTACCCAATTTGAAACTGCTCAATTTGACAGGGAATAATCTCACAGGCTCGATTCCCAAGGCTCTGAGGGACAAGTCAACTACTGGTTTAACTTTAATTTTGGATGGAAATCCTGGTCTCTGTCAGACAAGTTCTTGCAAAGCCATTACAAAGAAGTTCATAAAACCACTTGTTGCATCCGTAGCTTCTGTGGCAGTTCTTACAACAATAGTCTACATTTCTTTGATGCTCTGCAGACATAAAAGAAAACATCATAGTGATTCCAAAGTGATGCTGGTCAAGAAAGATGATCAGATTAGATTAAAGAATCAAGGATTTTCTCAAGCTGAACTTCATAGAATTACCAAAGACTTTGAAACTGAAATTGGAGAAGGGGGATTTGGAAAGGTGTACCTTGGAAGACTAAAAGATGTTACACAAGTTGCTGTCAAGTTACTCTCTAAGTCATCGCAGCAAGGGTTTGATGAGTTTCAATCAGAGGCAAATTTGTTATCTCTTATTTATCATAAAAATCTAGTTTCTCTTGTTGGCTATTGTGATGATGGTGACATGAGAGCACTGATTTATGAATACATGGAAAAGGGAAATCTCCGGAACCTTCTATCAGATAACAACCCAAATGTTTTGAAGTGGAATGAAAGACTTCAAATTGCATTGGATGCTGCATGTGATTCCATAGATCTGGAAACTTGA 2109 0.4007 MKIRPLWILALVVPASLIIHLQKSAQVFASDDDQTDTGREISIDCGVTEESQDSNGFHHEADDAEFVESGKIYNVSSDDIYANSQEQVWEQMKTVRSFPEGVRNCYTLKPKNGKCNNYLIRVYMSYGNYDHKNSIPYFHLHLGVNFWEKIKFQNVTDIRRKTVVQLSPTNYIDVCLINVGKGTPFISLLELWPLSNSIYRASSSLLPLGLMTCVNLGMSENLKFIRYAADIYGRSWLNGKIDNSKPIYTSEGINIDVKEYRLPSDVLKTAVRAQNVSSSLYINLTSINFTADNEHYIYLHFFDFEEHSNGEVRSMEITFTDTIREPVTLKHEDVRTLVKKIPKGVILNGISITSTPGSSLPPMINAYEIYRALPQPNTPTHEEDVDAMRNIKHAYNIMRISWQGDPCMPIDYRWAGVTCNYSERIPRVTSLNMSSSKLAGQIVTSFSNLMTLEALDLSNNQLTGEIPESLAELPNLKLLNLTGNNLTGSIPKALRDKSTTGLTLILDGNPGLCQTSSCKAITKKFIKPLVASVASVAVLTTIVYISLMLCRHKRKHHSDSKVMLVKKDDQIRLKNQGFSQAELHRITKDFETEIGEGGFGKVYLGRLKDVTQVAVKLLSKSSQQGFDEFQSEANLLSLIYHKNLVSLVGYCDDGDMRALIYEYMEKGNLRNLLSDNNPNVLKWNERLQIALDAACDSIDLET 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0771 702 ProSiteProfiles Leucine-rich repeat profile. 451 474 IPR001611 GO:0005515
Prci13g0771 702 Pfam Leucine rich repeat 426 486 IPR001611 GO:0005515
Prci13g0771 702 FunFam serine/threonine-protein kinase PBS1-like 555 663 - -
Prci13g0771 702 Pfam Malectin-like domain 43 371 IPR024788 -
Prci13g0771 702 Gene3D Ribonuclease Inhibitor 385 504 IPR032675 -
Prci13g0771 702 Pfam Protein tyrosine and serine/threonine kinase 590 694 IPR001245 GO:0004672|GO:0006468
Prci13g0771 702 PRINTS Leucine-rich repeat signature 473 486 - -
Prci13g0771 702 PRINTS Leucine-rich repeat signature 452 465 - -
Prci13g0771 702 Gene3D Transferase(Phosphotransferase) domain 1 575 695 - -
Prci13g0771 702 SUPERFAMILY Protein kinase-like (PK-like) 582 694 IPR011009 -
Prci13g0771 702 ProSiteProfiles Protein kinase domain profile. 588 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0771 702 FunFam Leucine-rich repeat receptor-like kinase 383 515 - -
Prci13g0771 702 SMART tyrkin_6 588 702 IPR020635 GO:0004713|GO:0006468
Prci13g0771 702 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Prci13g0771 702 SUPERFAMILY L domain-like 409 496 - -
Prci13g0771 702 PANTHER OS07G0107800 PROTEIN-RELATED 41 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0771 Prci-Chr13 6303220 6308809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0771 41 694 Receptor kinase-like Gene Family AT2G19210 38.589 3.99e-135 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0771 Malectin_like 2.4e-71 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0771 - - pcin:129289802 735.717