Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0770 ATGAAAACAGTGAGAAGTTTCCCGGAAGGGGTGAGAAACTGCTACACACTCAAACCCAAGAATGGCAAATGCAACAACTATCTCATTAGGGTTTACATGTCATATGGAAACTACGACCACAAAAACTCCATTCCATACTTTCATTTACATCTTGGCGTCAATTTTTGGGAAAAAATTAAGTTCCAGAATGTCACTGATATTCGACGAAAAACAGTCGTTCAACTCTCCCCAACAAACTACATTGATGTCTGTCTTATCAACGTTGGTAAAGGGACACCTTTTATATCGTTGTTGGAACTTTGGCCTTTGTCAAACTCTATATATCGAGCCTCCTCTAGTTTGCTCCCATTAGGCCTCATGACGTGTGTTAACCTGGGCATGTCCGAAAACCTTAAATTTATCAGATATGCAGCTGATATCTATGGTAGGTCCTGGTTAAATGGAAAGATCGACAACTCAAAGCCAATATACACATCTGAAGGAATTAACATTGACGTGAAAGAGTACAGGCTGCCAAGTGATGTGTTAAAAACTGCAGTCCGAGCACAGAATGTTTCGTCTTCCTTATATATCAACTTGACCTCCATTAATTTTACAGCAGATAACGAGCATTATATTTACCTTCATTTTTTTGATTTCGAGGAGCATTCTAATGGTGAGGTAAGAAGCATGGAAATCACTTTCACTGATACCATCCGAGAGCCTGTAACTCTTAAACACGAAGATGTCCGTACCTTGGTTAAGAAAATTCCAAAAGGGGTTATTCTTAATGGTATTTCAATCACTTCGACCCCAGGCTCTAGCTTACCCCCCATGATCAATGCCTATGAGATTTACAGAGCACTGCCCCAACCAAATACCCCAACCCATGAAGAAGATGTTGATGCTATGCGGAATATCAAACATGCTTATAACATCATGAGAATCAGCTGGCAAGGTGATCCCTGCATGCCGATAGATTATAGATGGGCAGGTGTGACTTGCAACTACTCAGAGAGAATTCCAAGGGTCACTTCTTTGAACATGAGCTCAAGCAAATTGGCGGGACAGATTGTTACTTCATTCTCTAATCTCATGACATTGGAGGCCTTGGATTTGTCGAACAACCAATTAACAGGGGAAATACCGGAATCTTTAGCAGAACTACCCAATTTGAAACTGCTCAATTTGACAGGGAATAATCTCACAGGCTCGATTCCCAAGGCTCTGAGGGACAAGTCAACTACTGGTTTAACTTTAATTTTGGATGGAAATCCTGGTCTCTGTCAGACAAGTTCTTGCAAAGCCATTACAAAGAAGTTCATAAAACCACTTGTTGCATCCGTAGCTTCTGTGGCAGTTCTTACAACAATAGTCTACATTTCTTTGATGCTCTGCAGACATAAAAGAAAACATCATAGTGATTCCAAAGTGATGCTGGTCAAGAAAGATGATCAGATTAGATTAAAGAATCAAGGATTTTCTCAAGCTGAACTTCATAGAATTACCAAAGACTTTGAAACTGAAATTGGAGAAGGGGGATTTGGAAAGGTGTACCTTGGAAGACTAAAAGATGTTACACAAGTTGCTGTCAAGTTACTCTCTAAGTCATCGCAGCAAGGGTTTGATGAGTTTCAATCAGAGGCAAATTTGTTATCTCTTATTTATCATAAAAATCTAGTTTCTCTTGTTGGCTATTGTGATGATGGTGACATGAGAGCACTGATTTATGAATACATGGAAAAGGGAAATCTCCGGAACCTTCTATCAGATAACAACCCAAATGTTTTGAAGTGGAATGAAAGACTTCAAATTGCATTGGATGCTGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCGCCAATAATTCATAGGGACCTTAAATCTTCTAACATCTTGCTAAGTGAAAATATGCAAGCCAAGATAGCTGATTTTGGACTATCTAAAGCTTTTGCCAATGATACTGATAGTCATATTTCAACTCGACCAGTAGGCACATTTGGTTACCTCGACCCTGAATTCCATAGATCTGGAAACTTGAACAAGAAAAGTGATGTTTATAGTTTTGGAATAATTCTGCTGGAGCTAATGACTGGCCAGAGAGCAATAACTGGAACATCAGAAGGCACACGTCACATATCTGATTGGGTGAATCCAAAGCTTGAGATTGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAAGAAAATTCAGCACAGCTTCAGCATGGAAGCTTTTAGAGGTTGCCATGTCTTGCATAGCACCAATAGCAATCCAAAGACCTGATATAAGTTGTGTTGTTATTGATCTAAAGCAATGTTTGGCCATGGAAACATCACTTGAAAGTGCAGAAAGCAGCAGTTTAATCTCAAGCACAACATTGGATTCAAGTTATTCTCAGTCTGGAATGTCATACTCACCTCCATCTGCTAGGTAG 2424 0.3965 MKTVRSFPEGVRNCYTLKPKNGKCNNYLIRVYMSYGNYDHKNSIPYFHLHLGVNFWEKIKFQNVTDIRRKTVVQLSPTNYIDVCLINVGKGTPFISLLELWPLSNSIYRASSSLLPLGLMTCVNLGMSENLKFIRYAADIYGRSWLNGKIDNSKPIYTSEGINIDVKEYRLPSDVLKTAVRAQNVSSSLYINLTSINFTADNEHYIYLHFFDFEEHSNGEVRSMEITFTDTIREPVTLKHEDVRTLVKKIPKGVILNGISITSTPGSSLPPMINAYEIYRALPQPNTPTHEEDVDAMRNIKHAYNIMRISWQGDPCMPIDYRWAGVTCNYSERIPRVTSLNMSSSKLAGQIVTSFSNLMTLEALDLSNNQLTGEIPESLAELPNLKLLNLTGNNLTGSIPKALRDKSTTGLTLILDGNPGLCQTSSCKAITKKFIKPLVASVASVAVLTTIVYISLMLCRHKRKHHSDSKVMLVKKDDQIRLKNQGFSQAELHRITKDFETEIGEGGFGKVYLGRLKDVTQVAVKLLSKSSQQGFDEFQSEANLLSLIYHKNLVSLVGYCDDGDMRALIYEYMEKGNLRNLLSDNNPNVLKWNERLQIALDAACGLDYLHNGCKPPIIHRDLKSSNILLSENMQAKIADFGLSKAFANDTDSHISTRPVGTFGYLDPEFHRSGNLNKKSDVYSFGIILLELMTGQRAITGTSEGTRHISDWVNPKLEIGDIQAIVDPRLERKFSTASAWKLLEVAMSCIAPIAIQRPDISCVVIDLKQCLAMETSLESAESSSLISSTTLDSSYSQSGMSYSPPSAR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0770 807 SUPERFAMILY L domain-like 318 405 - -
Prci13g0770 807 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0770 807 PANTHER OS07G0107800 PROTEIN-RELATED 2 775 - -
Prci13g0770 807 Pfam Malectin-like domain 2 280 IPR024788 -
Prci13g0770 807 ProSiteProfiles Leucine-rich repeat profile. 360 383 IPR001611 GO:0005515
Prci13g0770 807 FunFam Leucine-rich repeat receptor-like kinase 292 424 - -
Prci13g0770 807 Gene3D Transferase(Phosphotransferase) domain 1 574 790 - -
Prci13g0770 807 PRINTS Leucine-rich repeat signature 382 395 - -
Prci13g0770 807 PRINTS Leucine-rich repeat signature 361 374 - -
Prci13g0770 807 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 573 779 - -
Prci13g0770 807 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Prci13g0770 807 Pfam Leucine rich repeat 335 395 IPR001611 GO:0005515
Prci13g0770 807 Pfam Protein tyrosine and serine/threonine kinase 499 701 IPR001245 GO:0004672|GO:0006468
Prci13g0770 807 Gene3D Ribonuclease Inhibitor 294 412 IPR032675 -
Prci13g0770 807 SUPERFAMILY Protein kinase-like (PK-like) 484 766 IPR011009 -
Prci13g0770 807 SMART serkin_6 497 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0770 807 CDD STKc_IRAK 503 768 - -
Prci13g0770 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Prci13g0770 807 Gene3D Phosphorylase Kinase; domain 1 503 573 - -
Prci13g0770 807 FunFam serine/threonine-protein kinase PBS1-like 464 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0770 Prci-Chr13 6302652 6308607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0770 4 773 Receptor kinase-like Gene Family AT1G07560 42.362 0.0 592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0770 Malectin_like 1.1e-63 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0770 - - pcin:129289802 967.992