Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0769 ATGAAGATCAGGCCACTCTGGATTCTGGCTTTGGTGGTGCCTGCTTCATTGATCATCCATCTTCAAAAGTCAGCACAAGTTTTTGCCTCTGATGATGATCAAACTGATACAGGCCGGGAGATAAGCATTGATTGTGGGGTAACTGAAGAAAGTCAGGATTCAAATGGATTTCATCACGAGGCAGATGATGCAGAGTTTGTAGAATCTGGCAAAATATACAACGTGTCCTCTGATGACATCTATGCTAATAGCCAAGAACAGGTTTGGGAGCAAATGAAAACAGTGAGAAGTTTCCCGGAAGGGGTGAGAAACTGCTACACACTCAAACCCAAGAATGGCAAATGCAACAACTATCTCATTAGGGTTTACATGTCATATGGAAACTACGACCACAAAAACTCCATTCCATACTTTCATTTACATCTTGGCGTCAATTTTTGGGAAAAAATTAAGTTCCAGAATGTCACTGATATTCGACGAAAAACAGTCGTTCAACTCTCCCCAACAAACTACATTGATGTCTGTCTTATCAACGTTGGTAAAGGGACACCTTTTATATCGTTGTTGGAACTTTGGCCTTTGTCAAACTCTATATATCGAGCCTCCTCTAGTTTGCTCCCATTAGGCCTCATGACGTGTGTTAACCTGGGCATGTCCGAAAACCTTAAATTTATCAGATATGCAGCTGATATCTATGGTAGGTCCTGGTTAAATGGAAAGATCGACAACTCAAAGCCAATATACACATCTGAAGGAATTAACATTGACGTGAAAGAGTACAGGCTGCCAAGTGATGTGTTAAAAACTGCAGTCCGAGCACAGAATGTTTCGTCTTCCTTATATATCAACTTGACCTCCATTAATTTTACAGCAGATAACGAGCATTATATTTACCTTCATTTTTTTGATTTCGAGGAGCATTCTAATGGTGAGGTAAGAAGCATGGAAATCACTTTCACTGATACCATCCGAGAGCCTGTAACTCTTAAACACGAAGATGTCCGTACCTTGGTTAAGAAAATTCCAAAAGGGGTTATTCTTAATGGTATTTCAATCACTTCGACCCCAGGCTCTAGCTTACCCCCCATGATCAATGCCTATGAGATTTACAGAGCACTGCCCCAACCAAATACCCCAACCCATGAAGAAGATGTTGATGCTATGCGGAATATCAAACATGCTTATAACATCATGAGAATCAGCTGGCAAGGTGATCCCTGCATGCCGATAGATTATAGATGGGCAGGTGTGACTTGCAACTACTCAGAGAGAATTCCAAGGGTCACTTCTTTGAACATGAGCTCAAGCAAATTGGCGGGACAGATTGTTACTTCATTCTCTAATCTCATGACATTGGAGGCCTTGGATTTGTCGAACAACCAATTAACAGGGGAAATACCGGAATCTTTAGCAGAACTACCCAATTTGAAACTGCTCAATTTGACAGGGAATAATCTCACAGGCTCGATTCCCAAGGCTCTGAGGGACAAGTCAACTACTGGTTTAACTTTAATTTTGGATGGAAATCCTGGTCTCTGTCAGACAAGTTCTTGCAAAGCCATTACAAAGAAGTTCATAAAACCACTTGTTGCATCCGTAGCTTCTGTGGCAGTTCTTACAACAATAGTCTACATTTCTTTGATGCTCTGCAGACATAAAAGAAAACATCATAGTGATTCCAAAGTGATGCTGGTCAAGAAAGATGATCAGATTAGATTAAAGAATCAAGGATTTTCTCAAGCTGAACTTCATAGAATTACCAAAGACTTTGAAACTGAAATTGGAGAAGGGGGATTTGGAAAGGTGTACCTTGGAAGACTAAAAGATGTTACACAAGTTGCTGTCAAGTTACTCTCTAAGTCATCGCAGCAAGGGTTTGATGAGTTTCAATCAGAGGCAAATTTGTTATCTCTTATTTATCATAAAAATCTAGTTTCTCTTGTTGGCTATTGTGATGATGGTGACATGAGAGCACTGATTTATGAATACATGGAAAAGGGAAATCTCCGGAACCTTCTATCAGATAACAACCCAAATGTTTTGAAGTGGAATGAAAGACTTCAAATTGCATTGGATGCTGCATGTGGATTGGACTATCTACATAATGGTTGTAAGCCGCCAATAATTCATAGGGACCTTAAATCTTCTAACATCTTGCTAAGTGAAAATATGCAAGCCAAGATAGCTGATTTTGGACTATCTAAAGCTTTTGCCAATGATACTGATAGTCATATTTCAACTCGACCAGTAGGCACATTTGGTTACCTCGACCCTGAATTCCATAGATCTGGAAACTTGAACAAGAAAAGTGATGTTTATAGTTTTGGAATAATTCTGCTGGAGCTAATGACTGGCCAGAGAGCAATAACTGGAACATCAGAAGGCACACGTCACATATCTGATTGGGTGAATCCAAAGCTTGAGATTGGGGATATCCAAGCCATTGTGGATCCAAGATTAGAAAGAAAATTCAGCACAGCTTCAGCATGGAAGCTTTTAGAGGTTGCCATGTCTTGCATAGCACCAATAGCAATCCAAAGACCTGATATAAGTTGTGTTGTTATTGATCTAAAGCAATGTTTGGCCATGGAAACATCACTTGAAAGTGCAGAAAGCAGCAGTTTAATCTCAAGCACAACATTGGATTCAAGTTATTCTCAGTCTGGAATGTCATACTCACCTCCATCTGCTAGGTAG 2697 0.4001 MKIRPLWILALVVPASLIIHLQKSAQVFASDDDQTDTGREISIDCGVTEESQDSNGFHHEADDAEFVESGKIYNVSSDDIYANSQEQVWEQMKTVRSFPEGVRNCYTLKPKNGKCNNYLIRVYMSYGNYDHKNSIPYFHLHLGVNFWEKIKFQNVTDIRRKTVVQLSPTNYIDVCLINVGKGTPFISLLELWPLSNSIYRASSSLLPLGLMTCVNLGMSENLKFIRYAADIYGRSWLNGKIDNSKPIYTSEGINIDVKEYRLPSDVLKTAVRAQNVSSSLYINLTSINFTADNEHYIYLHFFDFEEHSNGEVRSMEITFTDTIREPVTLKHEDVRTLVKKIPKGVILNGISITSTPGSSLPPMINAYEIYRALPQPNTPTHEEDVDAMRNIKHAYNIMRISWQGDPCMPIDYRWAGVTCNYSERIPRVTSLNMSSSKLAGQIVTSFSNLMTLEALDLSNNQLTGEIPESLAELPNLKLLNLTGNNLTGSIPKALRDKSTTGLTLILDGNPGLCQTSSCKAITKKFIKPLVASVASVAVLTTIVYISLMLCRHKRKHHSDSKVMLVKKDDQIRLKNQGFSQAELHRITKDFETEIGEGGFGKVYLGRLKDVTQVAVKLLSKSSQQGFDEFQSEANLLSLIYHKNLVSLVGYCDDGDMRALIYEYMEKGNLRNLLSDNNPNVLKWNERLQIALDAACGLDYLHNGCKPPIIHRDLKSSNILLSENMQAKIADFGLSKAFANDTDSHISTRPVGTFGYLDPEFHRSGNLNKKSDVYSFGIILLELMTGQRAITGTSEGTRHISDWVNPKLEIGDIQAIVDPRLERKFSTASAWKLLEVAMSCIAPIAIQRPDISCVVIDLKQCLAMETSLESAESSSLISSTTLDSSYSQSGMSYSPPSAR 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0769 898 SUPERFAMILY L domain-like 409 496 - -
Prci13g0769 898 Pfam Malectin-like domain 43 371 IPR024788 -
Prci13g0769 898 FunFam serine/threonine-protein kinase PBS1-like 555 663 - -
Prci13g0769 898 Pfam Leucine rich repeat 426 486 IPR001611 GO:0005515
Prci13g0769 898 Gene3D Ribonuclease Inhibitor 385 503 IPR032675 -
Prci13g0769 898 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Prci13g0769 898 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 664 870 - -
Prci13g0769 898 PANTHER OS07G0107800 PROTEIN-RELATED 41 866 - -
Prci13g0769 898 Gene3D Transferase(Phosphotransferase) domain 1 665 881 - -
Prci13g0769 898 PRINTS Leucine-rich repeat signature 452 465 - -
Prci13g0769 898 PRINTS Leucine-rich repeat signature 473 486 - -
Prci13g0769 898 ProSiteProfiles Leucine-rich repeat profile. 451 474 IPR001611 GO:0005515
Prci13g0769 898 CDD STKc_IRAK 594 859 - -
Prci13g0769 898 SMART serkin_6 588 876 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0769 898 FunFam Leucine-rich repeat receptor-like kinase 383 515 - -
Prci13g0769 898 SUPERFAMILY Protein kinase-like (PK-like) 575 857 IPR011009 -
Prci13g0769 898 Gene3D Phosphorylase Kinase; domain 1 594 664 - -
Prci13g0769 898 ProSitePatterns Protein kinases ATP-binding region signature. 594 616 IPR017441 GO:0005524
Prci13g0769 898 Pfam Protein tyrosine and serine/threonine kinase 590 792 IPR001245 GO:0004672|GO:0006468
Prci13g0769 898 ProSiteProfiles Protein kinase domain profile. 588 861 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0769 Prci-Chr13 6302652 6308806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0769 41 864 Receptor kinase-like Gene Family AT1G07560 41.268 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0769 Malectin_like 4.3e-71 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0769 - - pcin:129289802 1016.14