Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0767 ATGAGCATAGATTGTGGGTTGACCCCAGAGAGTTGGGACAACAATGATTTCCATTATGAGGCAGATGGTTCACCGTTTGTAGAATCTGGGAAAGTATATAGTGTATCCTCTGAGCATACCTTGACAAGTGATGAAGAACAGAGTTGGCAGCAACTCAACACGTTGAGAAGCTTTCCTGAAGGGCAAAGGAACTGCTATACACTCGCACCCAAACAAGGCAGAGGTAACAAATATCTCATAAGGGCTTTCTTCAAATATGGAAACTATGACAAAAACAATTCAATTCCAACATTTGATCTGCACCTTGGTGTCAATTATTGGACAACAATTTATTTAAGTGATTCTAGTGATGTTGTAAGATCCGAGGTGATTCACGTTGCCCAGTCTGACCACATTGACGTGTGTCTGATAAACAAAGGACAAGGAACACCATTCATTTCCTCGTTAGAGCTTTGGCCTTTGCCCATAAAGCTATATCAGCCGACTCCCAATTTACTCCCCCTTGCACTCACCACACGCCGTAACTTTGGCATGACCGAACGTTTCGATTTCGTCAGGTACCCGAATGATCCGTACGGTAGGTCTTGGTTCCAGGGTGACAAAGACACCAAAAACTCACGGCCAATCAGCACATCAATAGCGATTGACGATGATTCCAAAGAGTACAAACTACCAAAGGAAGTGTTGAGCACTGCAATCACACCACTGAATAGTTCGTTTCCATTAGTTGTCAACGTGAATGCTAGCACAAATCATGAGTATTATGTTTATCTTCATTTCTTTGAATTTGAGAAACATTCTCAGAATCAGCAGAGAAGTATGGACATTGCCTTCACTGATTCAATCCGAGACAACAACGTCACTCTTGAATACTTGCAACTCCAAACCATCGTTCATCGGATTCCAAGAGAACTCTCTCTTACTAATATTTCCATCACTTCCTCCCCAGGTTCTACTCTGCCCCCCATCGTCAACGATCTTGAGATCTACAGGGTACGACACAAACAAAATTCACCAACACGTGAAGGAGATGGCAAGTTTGATGCGATGAGGAATATCAGACACGGTTATAACATCATGAGAATCAGTTGGCAAGGAGATCCCTGCATGCCAGAGGATTATAGATGGGAAGGTGTAACTTGCAATAATTACTCTGGTAGCATTCCAAGGATCATTTCATTGAACTTGAGCTCAAGCAGACTAGATGGAGAGATTATGGGTACTATTTTCTCCAAACTCGACATGTTGGAGTCATTGGACTTGTCAAACAACCAACTGACTGGAGAAATACCAGAATCTTTAGCAAAAGTAGCCAATTTGAAAGTGCTTAATTTGACAGGAAATGATCTCATAGGTTTAGTTCCTGAGTCTCTGGAGGAGAAATCCGGCTTGACATTGAGTTTGGATGGAAATCCAGGTCTCTGTCACACAGCTAGCTCTTGCAAAACCAAAACGCTCATTGGACCACTTGTTGCCTCAGCAATAGCTTCTGCGGCAGTTCTTCTGATAGCAATTTTTATTCCTATCATGCTCTGCAAACGGAAAAGAAAACCACAAAATGCGATGTTGCCTAAGAAGGGTGGTGATTTTAGATCAAAATGTCAAGCATTTAGTCTGGAAGAAGTTGTTAGTATGACCAATAACTTTGAATCAGTAATTGGTGAAGGCGGATTTGGAAAAGTGTACCTTGGAAAATTACAACATGGTATCCAAGTTGCAGTCAAATTACTGTCCAAGTCATCACACCAAGGATTTACCGAGTTTGAATCAGAGGCAAAGCTATTATCATTGGTTTATCATAAAAACTTAGTTTCTCTTATCGGTTACTGTGACGATGGTGACATGAAAGCATTGATTTATGAATATATGGCAAAGGGAAATCTCCTACACCTATTGACAGGTAAGAGCCCTTATGTTATAAAGTGGAAAGAGAGACTTCAAATTGCATTCGATGCAGCATGTGGATTGAACTATCTACATAATGGTTGCAACCCACCAATAGTTCATCGAGACCTAAAATCATCTAACATCTTATTGAGTGAAAACATGCATGCCAAGATTGCTGATTTTGGACTCTGTAAAGTTTTTGCTAGTGATACTGATACCCATATTTCAACTCGTCCTGCTGGCACATTTGGCTATCTTGACCCTGAATTTCACAGATGCGGGAACTTGCACAAGAATAGTGATGTTTATAGTTTTGGGATAATTCTACTTGAGTTGATGACCGGACGACCAGCTATCATCAAAACATCTGAAGGTATAAATCACATAGTTGATTGGGTGACTCCAAAGTTTAAAGTGGGAGATATGGAATCCATTATGGATCCAAAATTAGAGGGAAAATTCAATATTGCTTCAGCAAGAAAGGTTATAGAGATAGCCATGTGTTGCATTGAAACAAGTGCAGTGAAAAGACCTGATATCAATAATGTAGAGAATGATCTGAAGCAGTGTCTGGCTCTGGAAACGAACAATGAAAGTGAAGAAAGCAGCAGTTTATTCTCAAGCAGCACATTTGATACAAGTTTTTATCAGTGTGGATCACACTCACCACCATCTGTTAGGTAA 2571 0.4057 MSIDCGLTPESWDNNDFHYEADGSPFVESGKVYSVSSEHTLTSDEEQSWQQLNTLRSFPEGQRNCYTLAPKQGRGNKYLIRAFFKYGNYDKNNSIPTFDLHLGVNYWTTIYLSDSSDVVRSEVIHVAQSDHIDVCLINKGQGTPFISSLELWPLPIKLYQPTPNLLPLALTTRRNFGMTERFDFVRYPNDPYGRSWFQGDKDTKNSRPISTSIAIDDDSKEYKLPKEVLSTAITPLNSSFPLVVNVNASTNHEYYVYLHFFEFEKHSQNQQRSMDIAFTDSIRDNNVTLEYLQLQTIVHRIPRELSLTNISITSSPGSTLPPIVNDLEIYRVRHKQNSPTREGDGKFDAMRNIRHGYNIMRISWQGDPCMPEDYRWEGVTCNNYSGSIPRIISLNLSSSRLDGEIMGTIFSKLDMLESLDLSNNQLTGEIPESLAKVANLKVLNLTGNDLIGLVPESLEEKSGLTLSLDGNPGLCHTASSCKTKTLIGPLVASAIASAAVLLIAIFIPIMLCKRKRKPQNAMLPKKGGDFRSKCQAFSLEEVVSMTNNFESVIGEGGFGKVYLGKLQHGIQVAVKLLSKSSHQGFTEFESEAKLLSLVYHKNLVSLIGYCDDGDMKALIYEYMAKGNLLHLLTGKSPYVIKWKERLQIAFDAACGLNYLHNGCNPPIVHRDLKSSNILLSENMHAKIADFGLCKVFASDTDTHISTRPAGTFGYLDPEFHRCGNLHKNSDVYSFGIILLELMTGRPAIIKTSEGINHIVDWVTPKFKVGDMESIMDPKLEGKFNIASARKVIEIAMCCIETSAVKRPDINNVENDLKQCLALETNNESEESSSLFSSSTFDTSFYQCGSHSPPSVR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0767 856 Gene3D Ribonuclease Inhibitor 349 476 IPR032675 -
Prci13g0767 856 Gene3D Phosphorylase Kinase; domain 1 525 622 - -
Prci13g0767 856 Gene3D Transferase(Phosphotransferase) domain 1 623 842 - -
Prci13g0767 856 CDD STKc_IRAK 553 818 - -
Prci13g0767 856 Pfam Protein tyrosine and serine/threonine kinase 549 815 IPR001245 GO:0004672|GO:0006468
Prci13g0767 856 PANTHER OS07G0107800 PROTEIN-RELATED 2 826 - -
Prci13g0767 856 SUPERFAMILY Protein kinase-like (PK-like) 533 816 IPR011009 -
Prci13g0767 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 667 679 IPR008271 GO:0004672|GO:0006468
Prci13g0767 856 SMART serkin_6 547 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0767 856 Pfam Leucine rich repeat 393 450 IPR001611 GO:0005515
Prci13g0767 856 SUPERFAMILY L domain-like 388 475 - -
Prci13g0767 856 ProSiteProfiles Protein kinase domain profile. 547 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci13g0767 856 ProSitePatterns Protein kinases ATP-binding region signature. 553 575 IPR017441 GO:0005524
Prci13g0767 856 Pfam Malectin-like domain 3 332 IPR024788 -
Prci13g0767 856 FunFam receptor-like protein kinase FERONIA 513 622 - -
Prci13g0767 856 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 623 831 - -
Prci13g0767 856 FunFam Leucine-rich repeat receptor-like kinase 346 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0767 Prci-Chr13 6293376 6300818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0767 1 828 Receptor kinase-like Gene Family AT1G05700 42.369 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci13g0767 Malectin_like 9.5e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0767 - - pcin:129290778 1283.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2072 12 38242590 38248972 Prci13g0767 13 6293376 6300818 CCT
Prci13g0767 13 6293376 6300818 Prci13g0767 13 6293376 6300818 ECH