Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0734 ATGTTCAACTCAGAAGATGAGGACATCCAGTCAAAAACCAAGGCTAAAAATGGTTCACGTGATGATGAACACAAAACGGAATCCAAAATTGGATCAAACTTGATCAGAAAAAACAATGCAAGTGACAGCCATAGAAAGGGATGGGTTTTTTCAGCTATCTCATTCTGTTGTGCTCTTATAAGCGTTGCATATTTCAGTAATGGACTGTGGGATCTTATTTCCAAATCGGAAGACTTTAAGCAGCTGAGCCTTTGTTTTGCTGCTCAGAGCACTCAAAATACCACTATATCAAAGCCTCTTTTAGCTCAAAAAAATGAAAACAAAAAATCAAAACTTTCACGTGCTAATTGTCTAAGCAAATTGACTTTCTCTTGGATTAATTCCTTATTGAGTTTGGGCTACTCCAAGCCACTAGCTCTTGAAGACATCCCATCTCTTGTTTCTGAAGATGAAGCTGCTTTAGCCTACCAAAAGTTTTATCATGTATGGGATTCCTATTTAAGGGATAGAAGCAAAAATAAAAGTACCAAAAACTTGGTTATGTGGTCCATATTAAGAGTTTACATGAAAGAGAACTTTCTCATAGCAATCCTGGCATTGCTTGGGACAATTGCTATAGTAGTTTGTCCTTTATTGCTCTATGCTTTTGTGACCTATTCAAATAGTAAAGAGGAAAATCTAAAAGAGGGTTTTGCCATACTGGGTTGTCTGATTATCTGCAAGGTCATTGAGTTAGGAATGAGAATGAGATCAGCTCTAATGGTGGCAATATATAATAAGCAGTTGAAGCTTTCAAGTGCAGCCAGAAGAAGACACTCAAATGGGGAAATAGTGAATTACATAGCTGTTGATGCTTATAGGATGAGAGAATTTCCATGGTGGTTTCACACCATGTGGACTTCAGTAGTACAACTTTTTCTGTCCGTTGGGGTCCTATTTGGTGTTGTTGGTCTTGGTGCTCTTCCTGGTTTAATCCCTATTCTAATATGTGGGTTTCTTAATATGCCCTTTGCAAAGATCATTCAAAAGTGTCAGTCAGAATTTATGATTGCACAAGACGAACGTCTAAGGTCAACTTCAGAGATCATAAATAATATGAAAATCATAAAGCTGCAATCTTGGGAGGAAAAGTTCAAGACCTTGACAGAAAGCCTTCGTACAAAAGAGTTCAAGTGGCTGGCTAAGGCACAATTCATAAAAGCTCATGGGACATTTTTATATTGGATGTCTCCAATAATATTTTCCTTTATAATCTTCCTTGGATGTGCTCTTTTCCAAAGTGCTCCTTTAAATGCTAGAACTATATTCACCATTCTTGCCACTTTAAGGAGCATGAGTGAACCTGTTACAATGATTCCAGAGGCTCTCTCTATTATAATCCAAGTTAAGGTCTCCTTTGATCGTCTCAACACATTTTTGCTTGATGATGAGCTAAGCAATGAGATCATTGGAAGAAACCTGGTGCAAAATTCAGTTAATAGTGTGGAAATTCAAGCAGGTAACTTCAGTTGGGATTTGGATTCAATATCTCCAACCTTGAGAGATTTGAATGTGAAAATCAAATGGGGGCAGAAAATTGCGATTTGTGGACCGATTGGAGCTGGAAAATCATCTATGATATATGCAATACTAGGCGAGATACCCACAATTTCAGGAACTGCTAAGGTGGGTGGAACTATAGCCTATGTTTCTCAAACATCATGGATCCAAAGTGGGACAATTCGTGACAATATACTCTTCGGCAAACCAATGGATGAGACCAGATACCAGGATGCCATAAAAGCATGTGCCTTGAATAAGGATATGAATGCTTTTAGCCATGGTGATCTTACAGAAATAGGTCAGCGAGGGATCAACTTGAGTGGAGGACAAAAGCAAAGGATTCAACTGGCTCGTGCAATATATAATGATGCTGATGTTTATCTCTTAGATGACCCTTTCAGTGCAGTAGATGCACATACTGCTGCTTTTCTATTCAATGATTGTGTCATGAATGCTCTAAGGAAGAAAACTGTCATTCTAGTGACTCATCAAGTGGAGTTCCTCTCACAAGTTGATAAAATCCTTGTCATGGAGGGTGGACTAGTTACTCAATCAGGATGTTATAAAGATCTTTTGACAAAAGGGACAACCTTTGAACAACTTGTAAATGCCCATAGAGAAGCAATATCAGGATCAGATCAAAATAATGAGATCCTAGGAGAATTTGAGGATGTAATAAATGTTCTTCAACCTTTAGAGTCTGATGGATTTTATCTCACTAAGGATGATAAGAGTGAGCAGGTTTTAATGAAAGGTCAACAGAGGCTACAGCTCACACAGGAGGAAGAAAAGGAGATTGGAGATGTTGGCTGGAAGCCATTTTGGGATTATATTTATCTCTGCAAAGGATCCTTACTTCTATGTTTAGTCATTTCAGCACAGGTGGCTTTCACTACTTTGAAAGTAGCATCAACTTTTTGGCTTGCTTTAGCCATTGAAGTACCAAAAGTAACGAATGGTATTTTGATTGGGGTTTACACAATAGTTTCACTTATAAGTATTGGTTTTATGTGGCTAAGATCTATCACGGGTGCACATCTTGGTTTAAAAGCCTCTACTTCTTTCTTTTCTAGTTTCAATAATGCTATTTTCAAGGCTCCTATGTTTTTCTTTGACTCAACTCCAGTAGGGAGAATTTTCACCAGGGCTTCATCAGATTTGAGTACATTAGACTTTGATGTACCTTTTGCACTCACCTTTATGGCATCTGGGGCAATAGATCTTCTGGCAACAATTGGGATAATGGTTTTTGTCACATGGCAAGTTCTTATTGTTGTAGTTCCCACCATAATAGCATCGAAATACATTCAGGACTATTATCAAGCCTCTTCAAGGGAACTAATCAGGATCAATGGAACCACCAAAGCTCCAATAATGAATTTCTCTGCTGAGACATCACTAGGAGTGGTGACTGTGAGAGCTTTCAACATGGTAGATAGATTTTACCAAAATTACCTCAAACTTGTGGACACAGATGCAAAGCAATTCTTTTATTATATTGTGGCCACTGAATGGTTAATTTTAAGGATTGAAGTACTTCAAAATTTGACACTCTTCACAACCGCTTTACTGCTTGTTCTACTCCCAAAAGGACTTGTGCCCCCAGGCCTTGCAGGACTTTCTCTATCATATGCTTTATCATTGACAGGATGCCAAATTTTTTTGAGTACATGTTTCTGCAACTTATCAAATTTTATTGTTTCCGTTGAACGAATTAATCAGTTTATTCACATACCAGAAGAGCCTCCTGCAATAGTGGAGAACAAAAAACCCCCACTTTCATGGCCTTTTAAGGGTAGGATTGAGCTTCAAAATCTTGAGATTAGATATCATCCAAATGCTTCATTAGTCCTCAAGGGAATCACTTGCACATTTGAAGAAGGGAATAGAGTGGGAATTGTAGGGAGGACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTTTGTTTCGCTTGGTTGATCCTACAAAAGGGGACATTCTTATAGATGGAATTAGCATATTACCAATGGGATTGAAGGATTTGAGAATGAAGCTGAGCATTATTCCTCAAGAACCCACTCTTTTTAGGGGTAGCATCAGAACCAACTTGGATCCTCTTGGCCTCTACTCTGATAATGAAATATGGAAGGCTTTAGAGAAATGCCAGCTCAAAACAACAGTCATCAATCTACCAAATCTATTAGACTCTTATGTGAGTGATGAAGGAGAAAATTGGAGTGTGGGACAAAGACAACTCTTTTGTCTTGGAAGAGTACTTCTCAAGCAAAATAGAATTCTTGTTCTTGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATGCCATTTTGCAAAGAGTTATCAGACAAGAGTTTGCAAGATGCACAGTTATAACTGTGGCTCACAGAGTCCCAACTGTAATAGATAGTGACATGATCATGGTTCTCTCACATGGTATTAAAGTGGTGGAATATGATGAGCCTTCTAAGCTAATGGAGATGGACTCTTGTTTCTCTAAACTTGTTGCTGAGTATTGGTACAGCTGCCGCAAGAACATCTCTCATGTCCCAAATCTTTATTAG 4101 0.3838 MFNSEDEDIQSKTKAKNGSRDDEHKTESKIGSNLIRKNNASDSHRKGWVFSAISFCCALISVAYFSNGLWDLISKSEDFKQLSLCFAAQSTQNTTISKPLLAQKNENKKSKLSRANCLSKLTFSWINSLLSLGYSKPLALEDIPSLVSEDEAALAYQKFYHVWDSYLRDRSKNKSTKNLVMWSILRVYMKENFLIAILALLGTIAIVVCPLLLYAFVTYSNSKEENLKEGFAILGCLIICKVIELGMRMRSALMVAIYNKQLKLSSAARRRHSNGEIVNYIAVDAYRMREFPWWFHTMWTSVVQLFLSVGVLFGVVGLGALPGLIPILICGFLNMPFAKIIQKCQSEFMIAQDERLRSTSEIINNMKIIKLQSWEEKFKTLTESLRTKEFKWLAKAQFIKAHGTFLYWMSPIIFSFIIFLGCALFQSAPLNARTIFTILATLRSMSEPVTMIPEALSIIIQVKVSFDRLNTFLLDDELSNEIIGRNLVQNSVNSVEIQAGNFSWDLDSISPTLRDLNVKIKWGQKIAICGPIGAGKSSMIYAILGEIPTISGTAKVGGTIAYVSQTSWIQSGTIRDNILFGKPMDETRYQDAIKACALNKDMNAFSHGDLTEIGQRGINLSGGQKQRIQLARAIYNDADVYLLDDPFSAVDAHTAAFLFNDCVMNALRKKTVILVTHQVEFLSQVDKILVMEGGLVTQSGCYKDLLTKGTTFEQLVNAHREAISGSDQNNEILGEFEDVINVLQPLESDGFYLTKDDKSEQVLMKGQQRLQLTQEEEKEIGDVGWKPFWDYIYLCKGSLLLCLVISAQVAFTTLKVASTFWLALAIEVPKVTNGILIGVYTIVSLISIGFMWLRSITGAHLGLKASTSFFSSFNNAIFKAPMFFFDSTPVGRIFTRASSDLSTLDFDVPFALTFMASGAIDLLATIGIMVFVTWQVLIVVVPTIIASKYIQDYYQASSRELIRINGTTKAPIMNFSAETSLGVVTVRAFNMVDRFYQNYLKLVDTDAKQFFYYIVATEWLILRIEVLQNLTLFTTALLLVLLPKGLVPPGLAGLSLSYALSLTGCQIFLSTCFCNLSNFIVSVERINQFIHIPEEPPAIVENKKPPLSWPFKGRIELQNLEIRYHPNASLVLKGITCTFEEGNRVGIVGRTGSGKSTLVSALFRLVDPTKGDILIDGISILPMGLKDLRMKLSIIPQEPTLFRGSIRTNLDPLGLYSDNEIWKALEKCQLKTTVINLPNLLDSYVSDEGENWSVGQRQLFCLGRVLLKQNRILVLDEATASIDSATDAILQRVIRQEFARCTVITVAHRVPTVIDSDMIMVLSHGIKVVEYDEPSKLMEMDSCFSKLVAEYWYSCRKNISHVPNLY 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0734 1366 Pfam ABC transporter 513 647 IPR003439 GO:0005524
Prci13g0734 1366 FunFam ABC transporter C family member 10 176 477 - -
Prci13g0734 1366 FunFam ABC transporter C family member 3 1098 1350 - -
Prci13g0734 1366 SUPERFAMILY ABC transporter transmembrane region 786 1097 IPR036640 GO:0005524|GO:0016020
Prci13g0734 1366 MobiDBLite consensus disorder prediction 1 34 - -
Prci13g0734 1366 CDD ABC_6TM_ABCC_D1 194 469 IPR044746 GO:0140359
Prci13g0734 1366 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 803 1078 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g0734 1366 ProSitePatterns ABC transporters family signature. 620 634 IPR017871 GO:0005524|GO:0016887
Prci13g0734 1366 SMART AAA_5 522 695 IPR003593 GO:0016887
Prci13g0734 1366 SMART AAA_5 1141 1332 IPR003593 GO:0016887
Prci13g0734 1366 FunFam ABC transporter C family member 5 764 1096 - -
Prci13g0734 1366 CDD ABCC_MRP_domain2 1113 1334 - -
Prci13g0734 1366 Pfam ABC transporter 1132 1280 IPR003439 GO:0005524
Prci13g0734 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 493 718 IPR027417 -
Prci13g0734 1366 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1115 1350 IPR003439 GO:0005524
Prci13g0734 1366 Gene3D - 1098 1349 IPR027417 -
Prci13g0734 1366 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 497 718 IPR003439 GO:0005524
Prci13g0734 1366 FunFam Multidrug resistance protein associated1 474 737 - -
Prci13g0734 1366 Gene3D ABC transporter type 1, transmembrane domain 167 476 IPR036640 GO:0005524|GO:0016020
Prci13g0734 1366 Gene3D ABC transporter type 1, transmembrane domain 763 1096 IPR036640 GO:0005524|GO:0016020
Prci13g0734 1366 SUPERFAMILY ABC transporter transmembrane region 181 473 IPR036640 GO:0005524|GO:0016020
Prci13g0734 1366 Gene3D - 477 736 IPR027417 -
Prci13g0734 1366 MobiDBLite consensus disorder prediction 7 31 - -
Prci13g0734 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1104 1349 IPR027417 -
Prci13g0734 1366 CDD ABC_6TM_ABCC_D2 797 1090 IPR044726 GO:0140359
Prci13g0734 1366 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 245 461 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g0734 1366 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 113 1348 - -
Prci13g0734 1366 CDD ABCC_MRP_domain1 495 694 - -
Prci13g0734 1366 Pfam ABC transporter transmembrane region 244 446 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci13g0734 1366 Pfam ABC transporter transmembrane region 835 1059 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0734 Prci-Chr13 6091780 6102136 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0734 495 730 Calmodulin-binding Proteins AT2G36910 26.562 4.43e-21 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0734 - - qsa:O6P43_018290 1794.63