Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0702 ATGATAGCAGAGGCGTTTGTTTTGAAGCTTTTATTCAAGGAGTTATGGAAGAAGGTGGAGAAGGGTGTGAAGCACGAGAGCACAGCTCAAAACCTGAAGGCGAAGGAGAAGGAATTGAGTCCAGAGTTTGAGGAACTTGAAGAACTGGCCAGGAAGGCGAACATCCCGTCGGAGAAAACAGAGGAACTACGGAAGGCGATGACACAACTGCGAGAAGCTCGTCTCAACTACTCTCAAATTCAATGGTGGTGTTATTGCTGCCTGGCGCCATGTTACCAGGAGGAACTCGAGAAAGCAGACAAGAAGATGAAAGATTTCTTATCGGAGCGGTTGCCGTTGGAGAATTCAAAGCATCTGCTCTTGATCCTCTGCCTGCTGCAAACGAAGGCAGCAGATCAGACCGATCGTGACATTGGGCAACCAGAAATACTAAGGAGTGGCGATCTTGACAAAATCTCAGAGTCTACACTGCCACTGAATGCTCCATTGATGAAAAAATTGAAGGCTTGCCTCATGATGGAAGGGCGTGATAGCATCCTTAACTTGACTGGTTTTGCCGGCTCCGGGAAGACCACCTTCGCTCAACGGCTCTGTTGTGATAAGGATGTCCGAGGTTGGTTCAACGACATCATGTTCGTGTCCGTAGGTTCGATTATTGAGAGCACTGGAGATATTCTAGTGAAGCGTTTAAAAGATGAGTTGCATGGAAATGAAAATAGAAAGGCGGTGTTGCTGGTGCTGGATAACGTTGAGAGTAGTGGCTCAGAAGAGTTCGTTAACCAGTGTTTGAAGGAAATATCATCAAATTCTAAGTCGAAGATTTTGGTGACTTCAAGAGCTGCTATCCAAGGTTTAAACTCCGCAGAGCACATGCCGCTACTTGGTGAGGACGACGCGATCACTCTTTTAAGTCACTTTGTTCAGCCAATAGGCACCACCTCGTACAATCTTCCCAGCCATAGTACTCTCCGCCAGGTAGCGAGAGGTTGTGGAGGTTTTCCGATAATGATCAAAATAATTGGCACTGATCTCCGGGGCAAGCCCATTATATTTTGGCACCGTTTATTGAAAGAATGGTCCCAGCAAGGTCACCAAGGCTTGTTCGCTCATCTACAGAGTTCCTTGAGTATTTCCAGAGATTTTGAAAGCACCAGTAAATTCTTCATGGACCTTGGCTTATTCCCTCAAAATCAAGTCATTCCCGTAGCTGCCTTAGTCGACATGTGGGTCGAACTTTACCAACAAGACGAGGACGGCACAGATGCCATGATCCACATCTACCATTTGACAGCCATGAATTTGGCTGACATGGTACTTGTCAGGCGAATTGGTAGCGATGAAGACAATTACTACGATAACCACTACCTAACCCAGCATTATATTCTCAGACATCTGGCTCGCAAATATTCACGCCAACAGGAGGAAGCATTCGAGAGGGAAAGATTAGATATTGGAATATATGGAAATGATCGACCTGAATGGTGGCCAGAACAGCCACAGCAAAGGATCAATGACTTGGGACCAACTCTGCAACCAATAGCTGCTCGTATATTATCTATATCAACCGATCAAGCCGTTACTCCAGGTTGGTGCAACATTCAAGCAGCTCAGGCTGAGGTTCTGATCTTAAATCTCAAGACCTCAGAGTATACATTGCCGGAATTCATTAAGCATATGAGAAACCTGAAAGTTCTTATAGTGATCAATTATGGTTTCCGCCGGTCCACTGAGTTCAAAAACTTCGAGCTGCTACGTTTCCTACAGAGTCTCAGAAGAATCAGATTGCAGCATGTTTCAGTTCCTTGTCTCTTGGAATCGAAGAACTTGCACAAGCTATCACTTTACAAATGTGAAGTGAAGACGGCGTTTGAAAACAGCTCCATGGAATTCTCAAACGCAGTGCCAAATCTAACGGAGTTGAACATTGAGTTTTGTGAAGATTTGGTGAAGTTGCCAGCTGAGATTTGCAATATTGTTACCCTGAAGAAGCTCAGCATCAGTGTTTGCCGCAACTTTTCTGAACTTCCCCGAGAAATTGAGAAGCTTGAGAACTTGGAATTACTGAGGATTAGTTACTCTGATGAGTTTAGGTTTAGTGACTCTGATGAGTTTAAAGACATGCCAGAGCCAATCACAAAGCTGAAGAGATTAAAATTTCTTGATATCTCACACTGCATAAGCCTTAGAAAATTACCAGACGACATTGGTGAGCTGCAAAAACTTAGAAATCTTTATATGTCGGGTTGCCCAATAAAGGAATTGCCAGGCTCCGTCATGAATTTGACGCATCTGAGGAGAGTGATATGCGATGAACATTCATATGGTTTATGGGATGTTATCAAAGGTTTCATAAACTTCGAACTAGACATACAGACAACCGCCAGGGGCGTTACCTTAAGATGGTTCCCGGGAGACTTTGAAGGGGACAAAGAGATTGAGGAAGACATTGATGAAGCCCAGGAAGAATATTTTAATTGA 2478 0.4431 MIAEAFVLKLLFKELWKKVEKGVKHESTAQNLKAKEKELSPEFEELEELARKANIPSEKTEELRKAMTQLREARLNYSQIQWWCYCCLAPCYQEELEKADKKMKDFLSERLPLENSKHLLLILCLLQTKAADQTDRDIGQPEILRSGDLDKISESTLPLNAPLMKKLKACLMMEGRDSILNLTGFAGSGKTTFAQRLCCDKDVRGWFNDIMFVSVGSIIESTGDILVKRLKDELHGNENRKAVLLVLDNVESSGSEEFVNQCLKEISSNSKSKILVTSRAAIQGLNSAEHMPLLGEDDAITLLSHFVQPIGTTSYNLPSHSTLRQVARGCGGFPIMIKIIGTDLRGKPIIFWHRLLKEWSQQGHQGLFAHLQSSLSISRDFESTSKFFMDLGLFPQNQVIPVAALVDMWVELYQQDEDGTDAMIHIYHLTAMNLADMVLVRRIGSDEDNYYDNHYLTQHYILRHLARKYSRQQEEAFERERLDIGIYGNDRPEWWPEQPQQRINDLGPTLQPIAARILSISTDQAVTPGWCNIQAAQAEVLILNLKTSEYTLPEFIKHMRNLKVLIVINYGFRRSTEFKNFELLRFLQSLRRIRLQHVSVPCLLESKNLHKLSLYKCEVKTAFENSSMEFSNAVPNLTELNIEFCEDLVKLPAEICNIVTLKKLSISVCRNFSELPREIEKLENLELLRISYSDEFRFSDSDEFKDMPEPITKLKRLKFLDISHCISLRKLPDDIGELQKLRNLYMSGCPIKELPGSVMNLTHLRRVICDEHSYGLWDVIKGFINFELDIQTTARGVTLRWFPGDFEGDKEIEEDIDEAQEEYFN 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0702 825 Pfam Leucine Rich Repeat 716 737 IPR001611 GO:0005515
Prci13g0702 825 Gene3D - 154 286 IPR027417 -
Prci13g0702 825 Gene3D Ribonuclease Inhibitor 534 698 IPR032675 -
Prci13g0702 825 Gene3D Ribonuclease Inhibitor 699 785 IPR032675 -
Prci13g0702 825 Gene3D - 294 381 IPR042197 -
Prci13g0702 825 SUPERFAMILY RNI-like 545 768 - -
Prci13g0702 825 PRINTS Disease resistance protein signature 237 251 - -
Prci13g0702 825 PRINTS Disease resistance protein signature 330 344 - -
Prci13g0702 825 PRINTS Disease resistance protein signature 179 194 - -
Prci13g0702 825 PRINTS Disease resistance protein signature 712 728 - -
Prci13g0702 825 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 5 791 IPR039203 GO:0050832
Prci13g0702 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 374 IPR027417 -
Prci13g0702 825 Pfam NB-ARC domain 164 359 IPR002182 GO:0043531
Prci13g0702 825 Coils Coil 816 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0702 Prci-Chr13 5744333 5760541 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0702 587 764 WRKY Transcription Factor Family AT4G12020 29.648 4.65e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0702 - - pcin:129290545 1627.07