Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0683 ATGCCCATTCAAGCGTCTTCTTCTGTTCGGGTTTACTTCTTTTCTCTACTCTTTCTTGCTTTCTGGAGTTGCAGAATGGCTAGCCAAGAAATGGACGTGGTCGTTGCTGCTTCTGCTTCATCCTCTTCCTCTGCTCCAATTCCTCGAAAGAAATATGATGTTTTTATCAGTTTCAGAGGTGAAGACACCCGCAACAATTTCGTTAGCCATCTTCATGAAGCTCTCAAAAGAAACAAAATCGACACATACATCGACGATGGAATTGACAAAGGAGATGACGTGTGGGCAGCACTTGTCGAAGCCATTGAAGAGTCCATTCTATTCTTGATTGTCTTCTCAGAAAACTACGCATTTTCCACGTGGTGCTTGAACGAGCTCACCAAAATACTGGAGTGTACTCAACATCAGGACCATCTTGTGCTTCCAATATTTTATAAGACTGACCCATCACATGTCCGTAAGCAGACTGGAACTTATCAGTTAGCCTTTAAAAAGCATGAGAACAGCAACCAGAAGCAGCACGTGCCCAAGTGGAGGGCTGCTCTCACACGAGCGGCCAATTTATCTGGCTGGCCTTGTGGAGCCGAGAGGAATGAAGCAGAGCTTGTTAGAGGGATTGTCAAATGTGTTTCGATGAAGCTGGACTCTAAGTACACTAGTGAGTCAAGTGGGCTTGTTAGTGTTCAACAGCGAATTGCAGGTCTAGAATCTTTATTGTTCCATGCTTCAGAAGATGTTCGAATCATTGGAATTTGGGGCATGGGCGGGATTGGCAAGACAACCCTTGCAGGTGAAGTATTTCACAAATGGCGTTTTGAATATGAAGGAAGTTGTTTTTTGGCAAATGTAAGGGAAGAATCACATAGATACGGGATAACTCACATGAGGCATAAACTTCTTTCCGCCTTATTAGATGATGGTGACCCCCATGGTTGCATGCCCCATGTAGAAACTTCGTTTGCCATGAGGAGACTTAGTCGAAAAAAGGTTCTTATAGTTCTTGATGATGTGGACAATGCATGGCAAATAGAAAAGTTGGCTGGATCACATTCTTGGTTTGGACGGGGGAGTAGAATTATAATAACAACAAGAGATAAGCAAGTGATTAAGGATGCAGATTATATATATGAGGTTCAGGCATTGCGCTTTAATGAAGCTATTCAACTGTTCTATTTGAATGCTTTTAAAAATAATAGCATCGATCCAGTGTTTGAAGACTTGTCTGAGAGGGTAGTTGATTATACTAAAGGCAATCCCTTGGCAATAAAAGTTCTGGCTTCCCATCTTTGTGGCAAAGGTAAAAGAGAATGGGAAAGCCAGCTGGAGAAACTTCAAAAAATACCTGACAAAGAAATTCAACAAGCGTTGAGAGTAAGTTTTTCTGGGCTAGATCGTGTAGAGCAAAATCTCCTTTTGGATATTGCTTGTTTTTTCATAGGAAGAAGAGTTAAGGATATAAAATCTGTCTTAGATGCTGCTGGTTATTCAACTATTATTGGGTTAGAAAGGCTTCAAGACAAAGCGCTTTTGACTATTTCTAATGGATATGTCGAGATGCACAGCTTGATACAAGACATGGGTAGGGAAATTGTTCGTGAAGAACCTAATGAAGACCCTGAAAAATGTAGCCGATTGTGGGATTATAATGATATTTATCAAGTGTTGAGAGATAACTTGGGAACTGAAGCCGTTAGAGGCCTTACTTTGAATCGTTCACAAATTATTGGAGATCTGCACTTGAGTCCTCAAGTCTTTGGAAGGATGCGCAAGCTTAAATTTCTTGAGATCTACTCCAGTGATCATGAACAGCGAAAGGTCTTGCATTTTCCTGGAGGCCTGCAGTCGCTGCCTAATCAACTAAGGTATTTACATTGGGAAGGATATCCTTTAAAATCATTGCCGTCAACATTTTCTGCAGAAAACCTAGTCTCACTTCAACTGGAAAATAGCCAACTGAGACACCTTTGGCATGGAACTAAGTGA 1983 0.4135 MPIQASSSVRVYFFSLLFLAFWSCRMASQEMDVVVAASASSSSSAPIPRKKYDVFISFRGEDTRNNFVSHLHEALKRNKIDTYIDDGIDKGDDVWAALVEAIEESILFLIVFSENYAFSTWCLNELTKILECTQHQDHLVLPIFYKTDPSHVRKQTGTYQLAFKKHENSNQKQHVPKWRAALTRAANLSGWPCGAERNEAELVRGIVKCVSMKLDSKYTSESSGLVSVQQRIAGLESLLFHASEDVRIIGIWGMGGIGKTTLAGEVFHKWRFEYEGSCFLANVREESHRYGITHMRHKLLSALLDDGDPHGCMPHVETSFAMRRLSRKKVLIVLDDVDNAWQIEKLAGSHSWFGRGSRIIITTRDKQVIKDADYIYEVQALRFNEAIQLFYLNAFKNNSIDPVFEDLSERVVDYTKGNPLAIKVLASHLCGKGKREWESQLEKLQKIPDKEIQQALRVSFSGLDRVEQNLLLDIACFFIGRRVKDIKSVLDAAGYSTIIGLERLQDKALLTISNGYVEMHSLIQDMGREIVREEPNEDPEKCSRLWDYNDIYQVLRDNLGTEAVRGLTLNRSQIIGDLHLSPQVFGRMRKLKFLEIYSSDHEQRKVLHFPGGLQSLPNQLRYLHWEGYPLKSLPSTFSAENLVSLQLENSQLRHLWHGTK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0683 660 FunFam Disease resistance protein (TIR-NBS-LRR class) 48 216 - -
Prci13g0683 660 Gene3D - 49 211 IPR035897 -
Prci13g0683 660 PRINTS Disease resistance protein signature 248 263 - -
Prci13g0683 660 PRINTS Disease resistance protein signature 324 338 - -
Prci13g0683 660 PRINTS Disease resistance protein signature 415 429 - -
Prci13g0683 660 Pfam NB-ARC domain 238 450 IPR002182 GO:0043531
Prci13g0683 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 474 IPR027417 -
Prci13g0683 660 ProSiteProfiles TIR domain profile. 50 214 IPR000157 GO:0007165
Prci13g0683 660 SUPERFAMILY L domain-like 519 654 - -
Prci13g0683 660 Gene3D - 212 375 IPR027417 -
Prci13g0683 660 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 191 IPR035897 -
Prci13g0683 660 Pfam TIR domain 51 223 IPR000157 GO:0007165
Prci13g0683 660 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 655 IPR044974 GO:0006952
Prci13g0683 660 Gene3D Ribonuclease Inhibitor 536 659 IPR032675 -
Prci13g0683 660 SMART till_3 51 188 IPR000157 GO:0007165
Prci13g0683 660 Gene3D - 380 464 IPR042197 -
Prci13g0683 660 SUPERFAMILY "Winged helix" DNA-binding domain 451 555 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0683 Prci-Chr13 5608307 5612441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0683 46 660 WRKY Transcription Factor Family AT4G12020 34.295 4.19e-96 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0683 - - pcin:129291215 1313.13